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Detailed information on CNT30397549


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 3e-87

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30303048Triticum turgidumTriticum aestivum79.8838.5298.68532forward
CNT30441445Triticum turgidumAegilops tauschii64.7157.9394.2431forward
CNT30667543Triticum turgidumTriticum dicoccoides87.6936.396.92584forward
CNT30722589Triticum turgidumTriticum spelta64.7158.494.2431forward

Expression of CNT30397549

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MRCWWSRGMPSLSWIFAFTLSMVSKDSTSNMMVLPVRVLTKICIPPRRRSTR*

Sequence

>CNT30397549
AGCCAAGACCAATCGAGCCGGGTCCGTCCTAGCCACCCGAGCGACGCACCGGTTCGGCGGCTTATGAACTAACTGGTGGGGCCGGGTTGTCAGATACAGC
GTCAATACAGAGTTATACGCGGCTTAGCCCGTATTGCAGCGACCAGCCTCAAACATGGTACTGACTTGTAAAAAATCTGAATAATGGTACTGATCCGTTA
CAACTGCAAGTGTTATACTTCCCTGCAATTAACTCAAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAG
GCTGCTTACCAGCAAAGATGAGATGCTGGTGGTCTAGGGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCAAGGACTCCAC
CTCCAACATGATGGTCTTGCCTGTCAGGGTCTTGACGAAGATCTGCATACCACCACGAAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTG
TAGTCAGCAAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCAGGGAGATGTCCTCCTTGTCCTAGATCTTCGCCTTCA
CATTGTCGATGGTGTCCGACGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAA