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Detailed information on CNT30397102


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 6e-44

BLAST vs NONCODE:
NONSTUT000620, E-value = 4e-13

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30303670Triticum turgidumTriticum aestivum101.3584.9193.33450forward

Expression of CNT30397102

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MPSLSWILAFTLSMVSDDSTSRVMVLPVS

>peptide 2 (89 aa)
MNDRVRTTKDKPAGPTPGQLLTTAEAEHQVEGGFLLDVVVGKGATVLQLLASEDKALLVRGNALLVLDLGLHVVDGVRRLHLKGDGLARE

Sequence

>CNT30397102
GCACGATACAAAACCAACAGCAAATTAGCGCAAGCAGATTTATCTGAAATTCACTTATTCATTACTTGACGATACTGCTGTGCCAGCAACATTTTCAACC
AACATATAACATGGGGACTCGATAGTTTTCAAACCAACACATAGGACTGACACGAACAAGAAAACAGTTCAAATGAACGACAGGGTACGGACGACCAAGG
ATAAACCAGCAGGTCCAACGCCAGGGCAATTACTGACCACCGCGGAGGCGGAGCACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGGG
TGCGACCGTCCTCCAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGT
GTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGTG