Detailed information on CNT30397085


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-100

BLAST vs NONCODE:
NONGMAT000502, E-value = 2e-52

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30302747Triticum turgidumTriticum aestivum62.3875.4799.791418forward

Expression of CNT30397085

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPVSVFTKICICKEESHGQEIKKNLKGDGKNKEADQANSQ*

>peptide 2 (90 aa)
IQKLGSTAQKGDHKSTYSQTRTAKANEHRHITSKLTYSYLTVQMYLQLFAPNHRTRWSIKAADTVRLHTNETSLEQRRHRVQQQQQQVER*

>peptide 3 (61 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVIVLPVRVFTKICIPPRRRSTRWRVDSFWML*

>peptide 4 (29 aa)
MHRLTNGTTCHQGIHPDQPIQYAKSLRIR*

>peptide 5 (53 aa)
MPSLSWILALTLSMVSELSTSRVIVLLVRVFTKICIPPRRRSTRWRVDSFWML*

>peptide 6 (60 aa)
MDKLTMMEQETQMHGQAHNDGTTNRNAWTSFYSSSIFFSLIKILKIIGPSVCNTNVYRFH*

Sequence

>CNT30397085
AATCCAAAAACTAGGATCTACAGCCCAGAAAGGCGATCATAAATCCACATATAGCCAGACAAGAACTGCAAAGGCAAATGAGCACAGGCACATTACTTCA
AAGTTGACTTATTCATACTTAACGGTACAGATGTACCTGCAACTGTTTGCACCAAACCACAGGACTCGATGGTCCATTAAAGCAGCAGACACAGTACGAC
TTCACACAAACGAGACATCACTTGAACAAAGGCGACACAGGGTACAGCAGCAGCAGCAGCAGGTCGAACGATAGGGCAATTACTGACCACCACGGAGGCG
GAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCC
GGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGACGACTCAACCTCAAGGGTGATGGTCTTGCCTGTCAGTGTTTTCA
CAAAGATCTGCATCTGCAAAGAAGAATCGCATGGACAAGAAATAAAGAAGAACCTCAAGGGTGATGGTAAGAATAAAGAAGCAGACCAGGCAAACTCACA
ATGATGGAACAACAAATACTAATGCATGGACAAGCTCACAATGATGGAACAAGAAACACAAATGCATGGACAAGCTCACAATGATGGAACAACAAACAGA
AATGCATGGACAAGCTTCTACAGCAGCAGCATATTTTTTTCATTAATAAAGATATTAAAGATCATAGGGCCAAGCGTATGTAACACAAATGTCTACAGAT
TTCATTAATCTAATGATTCAACATAGCAGCCAGACATGCTTACATTATCTAAGATAGCTTCAGGGTAACAAATCAAGCACATCTGACACTAATCTACATG
TATTTGCTAACTCAATGATTCCACAAGCTTCAGGAGAAAAACATCTACAATCCTATGCCTATTAGGACGATCTTGGTACAACAGCAATCAGATAAAAAGC
AATAGATCAGGCAGCTACTATTTAGGATCATAAAGATTTACCAAGCCAGAGCGGAAATGTAATAATAGATAAAACATGCATAGATTAACATATGAGACCA
TACGGCATCACGAACTCATGTGGAAGACGGATATTAACCCTAAAGTAAAAAATAGGAAATAAACAGAAAATCCCTACGAATTCACTAAAGCTTAACCAAT
CTACCAACGCAGATATATAAGCTTATACACCAAGCCAGAGACTCAAACAGACATATTTTCTTCATCAAAGAGATACCAGCGAGCAAATAGGTTCATGCAC
ATCTAGACTATCAATTTTCTCACGGATTTGCATATAGTTGTTGGGCATGCTATCAGAACGAAACCTATCTTCGGGTCAAACCAATCTACAATCTTAGGCC
TACAGATCAGGCAGTAGACGCGTCTAGAGATAATTTTATATGGTATAAAAGCTACTTGGGCGAATCTATCAAGCAGGAAGACGAACTAGTACATAAACAT
GCATAGATTAACAAACGGGACCACATGTCATCAAGGAATTCATCCTGATCAACCCATTCAATACGCGAAATCCCTACGAATTCGCTAAATCTTCACCGAT
CTAACAACAGATCGGAGCCAAATTCCACAGTACCACACGTCCAACGAGAGCACTACGGAAACGTAGATCTAGACGATACGGGGAGAGGGGAAGGAATCGC
CGTACCTTGAGGCGGTGGGGATTCGACGAGCCTGGAGTCGATCGGAGACGAGATTGGTTGGGGATTTGTTGGTTCCGCTCCTGGGAGCTGTTGAATGCCC
TCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCAACCTCAAGGGTGATAGTCTTGCTCGTGAGGGTCTTCACGAAAATCTGCA
TACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGAT
GAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCAACCTCAAGGGTGATAGTCTTG
CCGGTGAGGGTCTTCACGAAAATCTGCATACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGAC
CGTCCTCCAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT