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Detailed information on CNT3039703


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30445180Marchantia polymorphaSaccharum spontaneum4.523.4292.3152reverse complement
CNT30604390Marchantia polymorphaOryza punctata4.3320.339450forward
CNT3051156Marchantia polymorphaCucumis sativus5.0220.9489.6658forward

Expression of CNT3039703

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MNTNGKLLTTLLGDANKCMTTIHSIPNGEMTGV*

>peptide 2 (36 aa)
MKLRQCDIRHSRQKARTGRERLGQSEFSEDSNPIAR*

>peptide 3 (42 aa)
MSPLSWNALKKLKRALVITDHRKMYCRRFLTIRNKPKLSEFD*

Sequence

>CNT3039703
CGCGTTTCAGTATTCTTAATTCTCGAGGGCAATGAGTGAGGTCTAGTGATTACTTGACCATCCAGCCTGGGAAATCGCATGGGCGGAGGACGCATTCACT
GCTCTCAGTGACCATCCCATAAATGCAACTCGAAAGAGCCTTCAGATCGAGACTAGTCGGAAGTAATACGGAGGGGCAATTCACCGTAGGTCTCTAAAAC
AGAGATGTACCCTTGCCCTTCTTGTCTCCTCCAATCTCGAAATGCTTGCATCGCTGCAATCAAGGAAACGAACGCAGATACATAAGGCATACATGTTACA
GTATATTCAGGGTATGTTGATTTGCTAAAAAACGTCTAAGTTTCTTTCCAATACATCGCACAGACAAAAGGCAACCGCTTACATTTTTGCAATTGAGAAT
CTAACGGGCTTAACTATTACCTCTTCATTACATTAAAGTGAGTGAAATGGGTTTTTTAAAAGTGCGACGATGAAACTACGTCAATGCGACATACGACATT
CACGACAGAAGGCACGGACAGGGCGAGAACGACTCGGCCAAAGTGAATTTTCGGAGGACAGTAACCCAATAGCCAGGTAAGGACGACTAAAATGAACAAA
ACTAAAAGGCAGGACCCTCATAAGCGCTCGCTACCTATATAACATAGTCGACATGTCGCCGCTGAGCTGGAATGCGTTAAAAAAATTGAAAAGGGCACTT
GTAATTACTGATCACAGGAAAATGTACTGTCGGAGGTTCCTGACAATACGTAATAAACCTAAACTTTCAGAATTCGATTGATTGAGAAGTGGAAGAGTGC
CGGAGTCTTTGATGGATGAGAGAGTGAATCTAACCGGGATGAATGCCCAAATATAAAATACACTCAAGGAAAAAGCTGATACTTAATGAATACTAACGGT
AAACTGCTGACAACACTGCTGGGGGATGCTAACAAATGCATGACAACAATCCACTCGATTCCAAATGGTGAAATGACTGGAGTGTAATTCAAAGGCGGAA
TATAGTGAGAGTACGTCCAGCGCATAAATGTCATCCAGTCAAGAGAATGAATGCAACTGACAGGAAGTTAAAAATCTGCACAAGTGAATATACATGAGGG
AGAGATAACACAGAGTGCACATACGGTTGATGAGAAGGAAATTGACAAAGATTAT