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Detailed information on CNT30396975


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30508435Triticum turgidumSolanum lycopersicum26.86.483.74123reverse complement

Expression of CNT30396975

Peptides detected in this lncRNA

>peptide 1 (54 aa)
HALDGCPGIEKEGRFQRRKAMGRDFSVIHGSPIGKPYPSSVASLRSLDFSNLAS*

>peptide 2 (46 aa)
MMEKPASSKRRRKSNRDPVSSGERERNKGFHQKKSEAVSFDLLWIG*

Sequence

>CNT30396975
ATCATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGATTTTTCTGTGATCCATGGATCTCCGAT
CGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAGCTGAAACATCTGAGTAGCTAAAGGAAGGAAAATCAAC
CGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGAACAAGGGTTTTCATCAAAAGAAATCCGAAGCGGTTTCATTCGATTTGTTGTGGATTGGATGATGGA
AAAACCAGCAAGCAGCAAGCGTAGAAGGAAAAGCAACCGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGAACAAGGGTTTTCATCAAAAGAAATCCGAA
GCGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCAGCAAGCAGCAAGCGT