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Detailed information on CNT3039596


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT005543, E-value = 1e-75

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30148543Marchantia polymorphaBrachypodium distachyon22.637.6993.01143reverse complement

Expression of CNT3039596

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MYILKAAELHQYSRFKRKRAYGGYLGTQRRGRA*

Sequence

>CNT3039596
CGAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGACTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGAAAACT
TTCCATTACAGTTTGTCTAACTTTAAATTTTTGTTTTTAATCAATCATATGTATATACTAAAAGCAGCTGAGCTACATCAGTATTCGAGGTTCAAACGAA
AAAGGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGCTGAAAATAAGTATAGATCCGGAGAT
TCCCGAATAGGTTAACCTTTGAAACTGCTGCTGAATTCATAGGCAGACAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGC
AAAAGCGATTCTCGGCGTAGCAAGCGACGAAATGCTTCGGGGAGCTGAAAATAAGTATAGATCCGGAGATTCCCGAATAGGTTAACCTTTGAAACTGCTG
CTGAATTCATAGGCAGACAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCTCGTAGTAGCGGCAAGCGA
AATGGGAACAGCCTAAACCGTGAAAACGGGGT