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Detailed information on CNT30395844


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 7e-92

BLAST vs NONCODE:
NONMTRT002042, E-value = 8e-45

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690921Triticum turgidumOryza sativa30.2529.0992.74468forward
CNT30190515Triticum turgidumSecale cereale39.8873.6390.44617forward
CNT30301827Triticum turgidumTriticum aestivum49.97100100773forward
CNT30225892Triticum turgidumHordeum vulgare37.1794.4294.61575forward
CNT30458211Triticum turgidumSaccharum spontaneum29.854.5691.11461forward
CNT30136268Triticum turgidumLolium perenne30.8386.192.03477forward
CNT30349330Triticum turgidumEragrostis tef30.1230.0692.92466forward
CNT30363663Triticum turgidumSorghum bicolor29.8659.8490.26462forward
CNT30595806Triticum turgidumOryza meridionalis29.5473.1292.56457forward
CNT30107350Triticum turgidumOryza longistaminata30.2554.2392.31468forward
CNT30100520Triticum turgidumOryza rufipogon29.9346.6791.79463forward

Expression of CNT30395844

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSSVMVLPVRVLTKICMPPLRRRTR*

>peptide 2 (72 aa)
MQSQRATTVISLLVVKTGRNKPEETFNKHIGSNSLIHTKPYQQLFPRNQHTSSGLMVHQTRYSRLNTNKTQD*

>peptide 3 (53 aa)
MRRCWSGGMPSLSWILALTLSIVSDDSTSRVMVLPVNVFTKICICREESRTGW*

Sequence

>CNT30395844
TTCCAAGATAAAAGAAACATCGATATATAACTTGAAAAATCTAATGATTTCACAGGAACATTGAGAGCTACAGCCCATAAAATGCAATCACAGAGAGCCA
CTACGGTGATATCACTGCTAGTTGTAAAAACTGGAAGAAACAAACCAGAAGAAACATTCAACAAGCATATTGGTTCAAATTCACTTATTCATACCAAACC
ATACCAGCAACTGTTTCCCCGAAACCAACACACATCATCAGGACTCATGGTCCATCAAACCAGATACAGTAGACTTAACACGAACAAGACACAGGACTAA
TAGCAGCAGGTCCAACGTCAGGGCAATTACTGACCACCACGGAGGCGGAGCACCAGGTGTAGGGTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTGC
GGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTC
GGAGGATTCCACCTCAAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCTCCCCTAAGGCGGAGGACAAGGTGAAGGGTGGACTCC
TTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGA
TCTTGGCCTTGACATTGTCGATTGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAATGTCTTCACAAAGATCTGCATCTGCAGAGAAGA
ATCCAGAACAGGATGGTAAGCCTCAAGCAGCACAGCAAGCAAAGTAACATGATAATGCTAATAATGCAGCCCTATACATAAAGCAATCGAAAACACGGTT
TTGCTAAAGCACATCTAGGTCAGATATGACCTAAGTATTGCACATCTTAAGTCCTATTCCATTGATTTTAGGTGAAGATTCATGCGGGTAATCTTCTTTT
AGTTTTAGTTTTCCTTTTTATGTTTGATTGAGTCACGCAATAACTATTAGCACATCTAGATGTGCCCTAGATAGACCAGAATAAACAAACGGCAGCAGCA
TATTTTCTTATCAAAGAGCTACTGACAGACGACAGGTTAAAATCTACAGATATCATCCATCTCAAGGGTTCCACATAGCTGCCGGACATGCTTACCATCT
AAGAAAATAAACCTAAGCTTTGGGTGATAAATAATCTTATAATCCTGGGCCTATTAGGATGATATTGGTACAAGCACTATTGAACTACTGCACATGAGCT
AATGAAATCGAGAAGGAACTGACGTACAAGTAGCAGATAAAACATGCATATGTTAACAAAATCCGAGACCATAAGCCATTAGGAAATCAACCAAGACGAA
CAGATCTATCCCTTCAATAAAAAAAATAGCAGAAAAGAAATCGCGAGGTACACGCGAAATCCAAACGAAGTCTGTGTGCGCGAATAGATCGGGGAACTAA
GCTACGTTCGTAGCATCAGGCCGGGGCAGGAACGGATCAAATTCGAC