Detailed information on CNT30395826


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186386Triticum turgidumSecale cereale17.1841.0184.46251reverse complement

Expression of CNT30395826

Peptides detected in this lncRNA

>peptide 1 (36 aa)
RCCHSLFHSHSFHCEGGFRPRNLPFRSVAGGKTGAI*

>peptide 2 (29 aa)
MLIHGEDNFLSILIYSPLIRGQQQWNRLV*

>peptide 3 (30 aa)
MHAREVSCMVENHLSPLAKQAGSNGKTVGS*

>peptide 4 (32 aa)
MLKNTVDVDPRRGQFPINIDLFSFDPGATTME*

>peptide 5 (35 aa)
MVELQRVQPVAEIPREVAPSQWKMRTRCKLNRQRY*

>peptide 6 (41 aa)
AAATPSSTATHSTVREDSDREIYRSGPSPAARPELYSAIHL*

>peptide 7 (52 aa)
MGSVTASSARLRRAAPRPAVDLAGSKTRPSRLVSLASGTPKASPRLWLTRSL*

Sequence

>CNT30395826
CGCTGCTGCCACTCCCTCTTCCACAGCCACTCATTCCACTGTGAGGGAGGATTCCGACCGAGAAATCTACCGTTCAGGTCCGTCGCCGGCGGCAAGACCG
GAGCTATATAGCGCCATCCATCTCTGACGCGCTTCGCCGCCCGGAGCTGTCACGGCTAGCGCCACCCGTCTCCGGCGCGATTCGCCGCCAGCAGCCACGG
GGTTCGAAGGCAGTAAGACAGGAATCGTCGTCGCTCACCTCCGGCATGCTGCGCGGCCTGGAGCCGTTGTCTTGGCTGGAGGCAAGATGGGATCCGTCAC
GGCTAGCTCTGCTCGCCTAAGGCGCGCGGCGCCACGCCCGGCCGTGGACTTGGCCGGCAGCAAGACGAGGCCGTCGCGGCTAGTGTCGCTCGCCTCCGGC
ACACCCAAGGCCAGCCCAAGGTTGTGGCTGACCCGCTCCCTGTGAGGTGGTGGCATGGTGGAACTGCAGCGCGTGCAGCCGGTGGCTGAGATTCCGCGGG
AGGTCGCGCCGTCACAGTGGAAGATGCGAACTCGATGCAAACTCAACAGGCAAAGGTATTGAAGAATGGCACCTGTGTCTCCTTCTTGGATTGACTGCAT
CCACTTTGATCGGAGATAATTTTTATAATCCTTTTGACCAAAGCTAAGACATCGCCTACCCCCTGCTTGTCTACTCATCACTTCATGACCAGATTTTGGT
CTAATACCTGAATCATTCAATATGTCAATCTAGGCCTTCTGAGCTTCTGTAATTCTTCTTTGGGATCGCAGTAGATGGGCTTTGCTTGGAGTTACGAGTT
CATGATTGCGCAAGAACATACCTACGGACGATGAAGTGGCAGGAGCTCCGTCCATGCTGAAGAACACCGTAGATGTTGATCCACGGAGAGGACAATTTCC
TATCAATATTGATCTATTCTCCTTTGATCCGGGGGCAACAACAATGGAATAGATTGGTATGAGAAAGGATGGATGAAGCCACGAAGAGATTTTGGCGGCA
ATCTGGTGTTAGGCGGGAGATAAACCTGTCATTTTGCTGATTTTCTGGAGCCTAACTGCAATTAGAGAGATACGCTGGGTTGTTTAAGTGGTGGGGTCCT
ACCAGGACAGGTGTCGGCCACCCGTTGGCCCTGCACGATAATGCGTGCTGGGAACCCTGCAGGAGAGCCCGACCAAGATTGGACAGTCCATTCACAGGAA
GGTCTAAAATTTTAATCGCACCTTCCTTCTTTTGCCTTTATTTATAGGGAGCAGGGGTGCTATAGGTGGTAGGGGTGTTGATCTGCTGAATCAATAGGGA
ATGTATAAATGTTGAGCTTCCCAAGCATAGTTGTCCCACACAGTAATAAACAAGGCGGTGAATGCATGCACGGGAGGTCTCATGCATGGTAGAAAATCAT
CTCTCCCCGTTGGCTAAGCAGGCAGGAAGTAATGGGAAAACAGTGGGAAGCTAGTCCAGAG