Detailed information on CNT30395667


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30443351Triticum turgidumAegilops tauschii39.95100.6386.96483forward

Expression of CNT30395667

Peptides detected in this lncRNA

>peptide 1 (36 aa)
RCCHSLFHSHSFHCEGGFRPRNLPFRSVAGGKTGAI*

>peptide 2 (41 aa)
AAATPSSTATHSTVREDSDREIYRSGPSPAARPELYSAIHL*

>peptide 3 (30 aa)
MHAREVSCMVENHLSPLAKQAGSNGKTVGS*

>peptide 4 (29 aa)
MLIHGEDNFLSILIYSPLIRGQQQWNRLV*

>peptide 5 (81 aa)
MVELQRVQPVAEIPREVAPSQWKMRTRCKLNRQRRKNIPTDDEVAGAPSMLKNTVDVDPRRGQFPINIDLFSFDPGATTME*

>peptide 6 (52 aa)
MGSVTASSARLRRAAPRPAVDLAGSKTRPSRLVSLASGTPKASPRLWLTRSL*

Sequence

>CNT30395667
CGCTGCTGCCACTCCCTCTTCCACAGCCACTCATTCCACTGTGAGGGAGGATTCCGACCGAGAAATCTACCGTTCAGGTCCGTCGCCGGCGGCAAGACCG
GAGCTATATAGCGCCATCCATCTCTGACGCGCTTCGCCGCCCGGAGCTGTCACGGCTAGCGCCACCCGTCTCCGGCGCGATTCGCCGCCAGCAGCCACGG
GGTTCGAAGGCAGTAAGACAGGAATCGTCGTCGCTCACCTCCGGCATGCTGCGCGGCCTGGAGCCGTTGTCTTGGCTGGAGGCAAGATGGGATCCGTCAC
GGCTAGCTCTGCTCGCCTAAGGCGCGCGGCGCCACGCCCGGCCGTGGACTTGGCCGGCAGCAAGACGAGGCCGTCGCGGCTAGTGTCGCTCGCCTCCGGC
ACACCCAAGGCCAGCCCAAGGTTGTGGCTGACCCGCTCCCTGTGAGGTGGTGGCATGGTGGAACTGCAGCGCGTGCAGCCGGTGGCTGAGATTCCGCGGG
AGGTCGCGCCGTCACAGTGGAAGATGCGAACTCGATGCAAACTCAACAGGCAAAGGCGCAAGAACATACCTACGGACGATGAAGTGGCAGGAGCTCCGTC
CATGCTGAAGAACACCGTAGATGTTGATCCACGGAGAGGACAATTTCCTATCAATATTGATCTATTCTCCTTTGATCCGGGGGCAACAACAATGGAATAG
ATTGGTATGAGAAAGGATGGATGAAGCCACGAAGAGATTTTGGCGGCAATCTGGTGTTAGGCGGGAGATAAACCTGTCATTTTGCTGATTTTCTGGAGCC
TAACTGCAATTAGAGAGATACGCTGGGTTGTTTAAGTGGTGGGGTCCTACCAGGACAGGTGTCGGCCACCCGTTGGCCCTGCACGATAATGCGTGCTGGG
AACCCTGCAGGAGAGCCCGACCAAGATTGGACAGTCCATTCACAGGAAGGTCTAAAATTTTAATCGCACCTTCCTTCTTTTGCCTTTATTTATAGGGAGC
AGGGGTGCTATAGGTGGTAGGGGTGTTGATCTGCTGAATCAATAGGGAATGTATAAATGTTGAGCTTCCCAAGCATAGTTGTCCCACACAGTAATAAACA
AGGCGGTGAATGCATGCACGGGAGGTCTCATGCATGGTAGAAAATCATCTCTCCCCGTTGGCTAAGCAGGCAGGAAGTAATGGGAAAACAGTGGGAAGCT
AGTCCAGAG