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Detailed information on CNT3039551


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596430Marchantia polymorphaOryza meridionalis25.3610.5283.9187forward
CNT30484721Marchantia polymorphaChara braunii39.0710.6982.84134forward
CNT30104319Marchantia polymorphaOryza rufipogon25.367.8583.9187forward
CNT30723871Marchantia polymorphaLupinus angustifolius25.361.8383.9187forward

Expression of CNT3039551

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MVTLGVEFEVVNERFHRLLHLSAGWRGDLSIISLNHTRGHIVQALSNNSDTLAHFLYPDKV

>peptide 2 (60 aa)
TLSIDFSEHNILGTNHCHHVCQHVMLGHKIQTLQMTKSRSPNLAAIRWLLQVHGNPRCRV*

Sequence

>CNT3039551
GGACTCTATCTATCGACTTCTCCGAACACAATATCTTGGGTACCAATCATTGTCACCACGTCTGCCAGCATGTGATGCTTGGACATAAAATCCAAACCTT
GCAGATGACCAAATCCAGGAGCCCGAATCTTGCAGCGATAAGGTGGCTCCTGCAGGTACATGGTAACCCTCGGTGTAGAGTTTGAAGTGGTGAATGAGAG
ATTCCATAGACTGCTTCATCTGAGTGCGGGATGGAGGGGTGATCTTTCTATCATCAGCCTTAATCATACCCGTGGGCATATCGTTCAAGCACTGAGCAAT
AATTCGGATACTCTGGCGCATTTCCTCTATCCTGACAAGGTAG