Detailed information on CNT30395285


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONBNAT002216, E-value = 1e-33

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30575045Triticum turgidumOryza barthii56.5362.3988.62589forward

Expression of CNT30395285

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MACTKKPNMENIARRPFLISLTLSSANASGSSARPSGSKLPPG*

>peptide 2 (32 aa)
MTDSTLLARNKVGGKCPCVVVDRVGEVVSEVL*

>peptide 3 (37 aa)
MVTRASPKRDDDGKFFTALPAKAGEESDMVVAAILID*

>peptide 4 (29 aa)
MAQRQWITSSSRFLAKVSGSADRPAVSHP*

>peptide 5 (30 aa)
MVMVLIKCEQQHICSDDRILVIYINLFGRT*

>peptide 6 (38 aa)
MPQGRRQGRADQSCRPGRAGQRSHRAVHRQCGSPQRRP*

Sequence

>CNT30395285
ACATGGTAATGGTGTTAATCAAATGCGAACAACAACATATTTGTTCGGATGATCGAATCCTCGTAATTTACATCAACCTATTTGGGAGAACATAAGCTTT
TGCAAAGAATCCTTGTCTCTTTTCCAGACAATCGAATCCTCGTAATTTACATCATGGTAGTACAACTTGGACTGCACAATGACTGACTCCACCTTACTTG
CCCGGAACAAAGTTGGTGGCAAATGCCCATGCGTTGTTGTTGACAGGGTCGGAGAGGTGGTCAGCGAGGTTCTCTAGTGGACCCTTGCCGGTGACGATGG
CTTGCACAAAGAAACCGAACATGGAAAACATAGCGAGGCGACCGTTCTTGATCTCCTTAACCTTGAGCTCGGCGAATGCCTCAGGGTCGTCGGCAAGGCC
GAGCGGATCAAAGCTGCCGCCCGGGTAGAGCGGGTCAACGATCTCACCGAGCGGTCCACCGGCAATGCGGTAGCCCTCAACGGCGCCCATGAGCACGACC
TGACAAGCCCAGATGGCAAGGATACTTTGTGCGTGCACAAGGCTTGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGATCCAGCCTTGA
ACCAAACAGCCTCGCCGAACTTCACACCGTTGCGGGCGAGCAGCTCGGGGAAGACGCAACCGAGCGCGCCAAGCATGGCCCAACGGCAGTGGATCACCTC
CAGCTCGCGGTTCTTGGCGAAGGTCTCGGGGTCAGCCGACAGACCAGCGGTGTCCCACCCGTAGTCGCCGGGGAACTCACCGGTCAGATAGCTCGGGGGC
TCACCAGAAAGCGGGCCGAGGTAGAGCACGCGATCAGAGCCGTACCACGGGCTGCCGGAGGCAACCTGCTTGGCCTTTGCCGCCGTCTTGCGCATGGTGA
CGCGAGCCTCCCCGAAAAGAGATGATGATGGCAAGTTCTTTACTGCCTTGCCGGCGAAGGCTGGGGAAGAGAGTGACATGGTGGTTGCGGCCATTCTGAT
TGACTAGGTTCTGTGTTGTTCTCCAAGAATGAGGAGTGGGTG