Detailed information on CNT30395284


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 9e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695265Triticum turgidumOryza sativa54.3653.9792.51374forward
CNT30299761Triticum turgidumTriticum aestivum56.54100100389forward
CNT3089114Triticum turgidumVigna radiata22.0915.882.24152forward
CNT30665641Triticum turgidumTriticum dicoccoides76.1668.77100524forward
CNT30651308Triticum turgidumRosa chinensis19.6223.4483.7135forward
CNT30579413Triticum turgidumEchinochloa crusgalli55.3841.0691.34381forward
CNT3049718Triticum turgidumCucumis sativus21.3728.1680.95147forward

Expression of CNT30395284

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSKEFLPVNLTSMGLTFLPMLRKFCPTPCLPALTFSG*

Sequence

>CNT30395284
CGCGTGTAACAAATTACTACTCATCATCAACATAAAAAGAAGCCGATCATGCATATGAACAACGTTAACATACAGCAGTATCATCATCAAATTACCATGT
ACATATAACCTGATGCATCATTATCACCGATCGAATCCATCATTCAAACTCGACAATTAAAATTACAGGACGTCCATCATCATCGCCACCCGCCAATAAC
TACCGGTCGATGAACTAGCACGTACGCATATACGACGTACGAGATTAGATGTCGAAGGAGTTCTTGCCGGTGAACTTGACCTCGATGGGGCTGACGTTCT
TGCCGATGCTGCGGAAGTTCTGCCCCACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTAGACGCCGTCCTTGGGGTGGAGGTACTGCACCTCGCCGTT
GGGGAAGACGCGGTAGAACTGGTAGGCGATCTTGTACTTGGAGCGGAGGCGGTTGGGCCCCTCGCGCATGATGGCGGCGCCGCCAGTGGGCATCTCGAAG
ACCTGCTCCTTGGGGGAGGTCCAGGTGATGACGTAGAACTCCTCGACCTGGGCCTTGCGGAGGAGGCCGCCCGTGCTGCCGCCGAAGATCGGGGACGGGG
TGGACGGGTCCAGCTGCGGCGGCACGAAGCCCGCGGGGGCGGGCTCCGCCGGCGGCGCCGCTGGGGCGGGGGTGTCCGAGGCCGCGGC