Detailed information on CNT30394300


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 6e-178

BLAST vs NONCODE:
NONMTRT001605, E-value = 7e-26

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30300127Triticum turgidumTriticum aestivum83.4692.4699.69969forward
CNT30665503Triticum turgidumTriticum dicoccoides79.594.1898.59923forward

Expression of CNT30394300

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MVTRASPKRNDDGRFFTALPAKAGEESDMVVAAILIDGGSMCSPRMRSGCGDGLRGSGQWAS*

>peptide 2 (57 aa)
LHKNLIIFFQTMNPRNLHHGSTIQTAQRHTSPQACAHTHTHLTCREQSWWRMPMRCC*

>peptide 3 (66 aa)
MACTKKPNMENIARFSSGPLPVTMACTKKPNMENIARRPFLISLTLSSVNASGSSARPSGSKLPPG*

>peptide 4 (50 aa)
MVVQFRPHNGILHRKRVHTHIHTLLAGNKVGGECPCVVVDGVGEVVSEVL*

>peptide 5 (38 aa)
MPQGRRQGRADQSCRPGRAGQRSHRAVHRQCGSPQRRP*

>peptide 6 (29 aa)
MAQRQWITSSSRFLAKVSGSADSPAVSHP*

Sequence

>CNT30394300
TTTGCACAAAAACCTCATAATTTTTTTCCAAACAATGAATCCTCGTAATTTACATCATGGTAGTACAATTCAGACCGCACAACGGCATACTTCACCGCAA
GCGTGTGCACACACACATACACACCTTACTTGCCGGGAACAAAGTTGGTGGCGAATGCCCATGCGTTGTTGTTGACGGGGTCGGAGAGGTGGTCAGCGAG
GTTCTCTAGTGGACCCTTGCCGGTGACGATGGCTTGCACAAAGAAACCGAACATGGAAAACATAGCGAGGTTCTCTAGTGGACCCTTGCCGGTGACGATG
GCTTGCACAAAGAAACCGAACATGGAAAACATAGCGAGGCGACCGTTCTTGATCTCCTTAACCTTGAGCTCGGTGAATGCCTCAGGGTCGTCGGCAAGGC
CGAGCGGATCAAAGCTGCCGCCCGGGTAGAGCGGGTCAACGATCTCACCGAGCGGTCCACCGGCAATGCGGTAGCCCTCAACGGCGCCCATGAGCACGAC
CTGACAAGCCCAGATGGCAAGGATACTTTGTGCGTGCACAAGGCTTGGGTTGCCCAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGATCCAGCCTTG
AACCAAACAGCCTCGCCGAACTTCACACCATTGCGGGCGAGAAGCTCGGGGAAGACGCAACCGAGCGCGCCAAGCATGGCCCAACGGCAGTGGATCACCT
CCAGCTCGCGGTTCTTGGCGAAGGTCTCGGGGTCAGCCGACAGCCCAGCGGTGTCCCACCCATAGTCGCCGGGGAATTCACCGGTCAGATAGCTCGGGGG
CTCACCAGAAAGCGGGCCGAGGTAGAGCACGCGGTCAGAGCCGTACCACGGGCTGCCGGAGGCAACCTGCTTGGCCTTTGCCGCTGTCTTGCGCATGGTG
ACGCGAGCCTCCCCGAAAAGAAACGACGATGGCAGGTTCTTCACTGCCTTGCCGGCAAAGGCTGGGGAAGAGAGTGACATGGTGGTTGCAGCCATTCTGA
TCGATGGAGGTTCTATGTGTTCTCCAAGAATGAGGAGTGGGTGTGGAGATGGCTTAAGGGGATCGGGGCAATGGGCTTCTTAAGGCAGTGGACGGGCAGA
GGAAATTGAACTGGTGTAAGCTGACAGGAGAGAGGTGCATAGCAAGAAATCTGTATCTTGG