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Detailed information on CNT30394125


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30188323Triticum turgidumSecale cereale90.1258.7492.84447forward
CNT30224849Triticum turgidumHordeum vulgare89.7299.3386.97445forward
CNT30721855Triticum turgidumTriticum spelta76.6110099.21380forward

Expression of CNT30394125

Peptides detected in this lncRNA

>peptide 1 (57 aa)
AQLSASRSEPSIPPGLGFLSDLYKYHARAILVHLRRRRSKQIPRPSPPAAPPPPPPR*

Sequence

>CNT30394125
GCCCAACTCAGCGCATCTCGATCTGAGCCGTCCATCCCTCCTGGGTTAGGGTTCCTTTCCGACCTCTATAAGTACCACGCGAGAGCCATCCTCGTACACC
TCCGCCGCCGCCGCAGCAAGCAGATACCGAGACCCAGTCCGCCTGCTGCGCCGCCGCCGCCACCTCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGGATG
AGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGCGATCCAAGTAGGTGAACGAGGAGAAAGCTTAACCTTGTATCACTGCACCAGTCTGTTGGGATG
ATAGGGTCTTTTGGTTCCTGATATGTCTGGGTTGTTGTGATATTTGGGGGATGCCAACCCTTGTAACATGAGGATAATTATATGCTTTCCTTCCAAGGCT
GGATATTTGGCTTAAGAAATATTATCGTCTATTTTTGATCTGTTGCCCTGCCTGTTCCTTCTTTTCTGGCATGCATCTGATGTTTTGAGTGTTATT