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Detailed information on CNT30393886


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30137478Triticum turgidumLolium perenne29.1442.9189.91109reverse complement
CNT30148341Triticum turgidumBrachypodium distachyon33.4242.6697.6125forward
CNT30579037Triticum turgidumEchinochloa crusgalli32.8913.0291.06123forward

Expression of CNT30393886

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKPLGMILAASSTSMMISLMAGFFSPLTAMR*

Sequence

>CNT30393886
TTCTTATAAAAATATCGACCTTTTTTCTAAGTTGAGTTTCCTATGTATGTTCGCACATTTTCACTCATAATATGCTGTGCATCATGAAATTGTTCTCAAC
AATTTGAACAATGGTAAAATACACAAATGTGAAGAGAGAACACAATAGTTATACAAGATTGGGTTCAGTTTCTTAAATACAAGAGAGCTTCCATTTCTCC
AGGATCCTATCAGCTCCTACACCAAGCCCACACAGATCGACACCACAAGCGGCGACGGGCCAGATGAAGCCCCTGGGGATGATCCTGGCGGCGAGCTCGA
CGTCGATGATGATCTCCCTCATGGCGGGCTTCTTCTCGCCGCTGACGGCGATGAGGTAGCTGCGGCCGACCCAC