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Detailed information on CNT30393877


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30249056Triticum turgidumAvena sativa41.544.9688.29205forward
CNT30137635Triticum turgidumLolium perenne20.2431.5596100forward
CNT30721781Triticum turgidumTriticum spelta67.61100.698.5334forward

Expression of CNT30393877

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MLSIKADIQLKKYYHLFLICCPACSFFSGMHLMFWSKLSVI

Sequence

>CNT30393877
GTCCCGATCTGAGCCGTCCATTCATCATCCTGGTTAGGGTTCCTTTCCGACCTCTATAAGTACCACGCGGGAGCCATCCTCGTACACCTCCGCCGCCGCA
GCAAGCAGACACCGAGAGTTCGATACCCAGTCCGCCTGCTGCGCCGCCACCTCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGGATGAGGAGGCTCAAGA
GGAAGCGCCGAAAGATGAGGCAGCGATCCAAGTAGGTGAACAACGAGGAGAAAGCTGAACCTTGTATCATTGCACCAGTATGTTGGGATGATAGGGTGTT
CTGGTTCCTGATATGTCTGGGTTGTTGTGATATTTGGGTGATGCCAACCCTTGTAACATGAGGATAATTATATGCTTTCCATCAAGGCGGATATTCAGCT
TAAGAAATATTATCATCTATTTTTGATTTGCTGCCCTGCCTGTTCCTTCTTTTCTGGCATGCATCTGATGTTTTGGTCTAAGTTGAGTGTTATT