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Detailed information on CNT30393321


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 9e-165

BLAST vs NONCODE:
NONMTRT001605, E-value = 1e-24

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30455809Triticum turgidumSaccharum spontaneum52.2552.3488.42570forward
CNT30149090Triticum turgidumBrachypodium distachyon48.454.187.12528forward

Expression of CNT30393321

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MPQGRRQGQADQNCRPGRVGRRSHRVVHRQRGSPRRRP*

>peptide 2 (43 aa)
MACTKKPNMENMARRPFLISLTLSSANASGSSARPSGSKLPPG*

>peptide 3 (31 aa)
MQPCKFAFVHDALVDIAQSTRQMGETEGGKT*

>peptide 4 (34 aa)
MVVQLRPHNSMLHREHTHLTCQERSWWQMPRHCC*

>peptide 5 (36 aa)
MQPSAPSMAQRQWITSSSRFLAKVSGSADRPAVSHP*

Sequence

>CNT30393321
AATTTTTTCAAACCATTTAAATAAAATTACAGAGAGAGCTTAAACAGACTGATGCACTCCCTGTGAAGCATGCATAACTCAAACTTCTATCTTGCTTTTA
GGCCAGTAACCACTCATTATTTTTGTTGCCCAGTATTTTGACCGAAGGCCAGAACAAGGCCTCAACCATGTACAACTCTCTTCTCGATGCAGCCCTGCAA
ATTTGCCTTTGTACATGATGCATTAGTTGACATTGCCCAGAGCACACGTCAAATGGGTGAGACTGAAGGTGGGAAAACATAAGCTCTTGCAGAGAATCTC
CTCTTAACGTTCTTAGACAATCGAATCCTCGTAATTTACATCATGGTAGTACAACTCAGACCACACAACAGCATGCTTCACCGGGAGCACACACACCTTA
CTTGCCAGGAACGAAGTTGGTGGCAAATGCCCAGGCATTGTTGTTGACGGGGTCGGCAAGGTGGTCAGCGAGGTTCTCGAGTGGACCCTTGCCGGTGACG
ATGGCTTGCACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGACCGTTCTTGATCTCCTTAACCTTAAGCTCGGCGAATGCCTCAGGGTCGTCGGCAA
GGCCAAGCGGATCAAAACTGCCGCCCGGGTAGAGTGGGTCGACGATCTCACCGAGTGGTCCACCGGCAACGCGGTAGCCCTCGACGGCGCCCATGAGCAC
GACCTGGCAAGCCCAAATGGCAAGGATACTTTGCGCGTGCACAAGGCTTGGGTTGCCGAGGTAGTCAAGGCCGCCCTCGCTGAAGATCTGGGATCCGGCC
TTGAACCAAACAGCCTCACCAAACTTAACGCCGTTGCGGGCGAGTAGCTCGGGGAAGATGCAACCGAGCGCGCCAAGCATGGCCCAACGGCAGTGGATCA
CCTCGAGTTCCCGGTTCTTGGCGAAGGTCTCGGGGTCAGCCGACAGACCAGCGGTGTCCCACCCGTAGTCGCCGGGGAACTCACCGGTCAGGTAGCTCGG
GGGCTCACCAGAAAGTGGGCCGAGGTAGAGCACGCGGTCAGAGCCATACCACGGGCTGCCAGAGGCAACCTGCTTGGCCTTTGCCGCTGTC