Detailed information on CNT3039278


BLAST search results

BLAST vs Swiss-Prot:
sp|P33560|TIP_ANTMA, E-value = 2e-49

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30375948Cucumis meloArabidopsis thaliana24.4911.684.5497forward
CNT30403205Cucumis meloBeta vulgaris28.5452.3182.3113forward
CNT30364747Cucumis meloSorghum bicolor24.7510.9783.6798forward
CNT30358937Cucumis meloLactuca sativa35.8627.9580.99142forward

Expression of CNT3039278

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MVMLPPMANPKVTAGFKWPPEMLAAIDTPTNNANAMAEPTPAKTKRRVAMNSER*

>peptide 2 (86 aa)
KLKEEASNNGAKQLGYPIEQASQDGDVATDGQPKGHCWVQVAAGDVGRHRHTHEQCKCNGGANTGENEKESGDELREIGFKRSRTE*

Sequence

>CNT3039278
CAAATTGAAGGAGGAGGCAAGCAACAATGGAGCCAAGCAATTGGGCTATCCAATAGAACAAGCCAGTCAAGATGGTGATGTTGCCACCGATGGCCAACCC
AAAGGTCACTGCTGGGTTCAAGTGGCCGCCGGAGATGTTGGCCGCCATCGACACACCCACGAACAATGCAAATGCAATGGCGGAGCCAACACCGGCGAAA
ACGAAAAGGAGAGTGGCGATGAACTCAGAGAGATAGGCTTTAAGAGAAGCCGCACTGAATGAATCGCCAGCGGAACCTATAGCCAACTTCACCATTTTCG
TTGAGGGAAAACCGAAGAAGGAAAGAGTTGAGTAAATAGAGAGAAGAAGGTAGAAGATTCTCGCCGGAGCTGAGGGATGGTCTGAGAGCAGCTTAG