Detailed information on CNT3039248


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021193Cucumis meloCitrullus lanatus38.5110.9988.95181forward
CNT3050434Cucumis meloCucumis sativus98.9421.4790.97465forward

Expression of CNT3039248

Peptides detected in this lncRNA

>peptide 1 (36 aa)
REFPCNTLISKIAVFKWQCQCCIAAVSHPMAHLFYT*

>peptide 2 (37 aa)
MAERRFAVQGILSHCFLFESKGCQVFLILILGHTVLL*

>peptide 3 (39 aa)
MAMPMLHRCRLTSNGSSVLYLNGRKKVCSSGDLKPLFLV*

Sequence

>CNT3039248
GCGGGAGTTCCCTTGCAATACCCTAATTTCGAAGATCGCTGTATTTAAATGGCAATGCCAATGTTGCATCGCTGCCGTCTCACATCCAATGGCTCATCTG
TTCTATACCTAAATGGCAGAAAGAAGGTTTGCAGTTCAGGGGATCTTAAGCCATTGTTTCTTGTTTGAATCCAAGGGCTGTCAAGTGTTCCTGATACTTA
TTTTGGGTCATACTGTACTTTTGTAAAGGAAAGTTTATACCCAATTCTTCTTATTTGAAAGCACTGTATCGTATCAAGAGTGATCACCACAGATTTGATA
TCTCATGACTGTAAATAAATACCAGCCTTTCGAACGTTCAATGGCGTTTTTAAGTTGTTCTGGCTGCTTATGTTTTATGTGATATTTGTCTTGATAGAAG
TTTGTAAAGAATTTTCCACAACTACTTTGGCTCTATGTTATTGAATGTTGAGAGCTTAGGAAAACCGTGC