Detailed information on CNT3039220


BLAST search results

BLAST vs Swiss-Prot:
sp|Q93WX6|CNIF1_ARATH, E-value = 4e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019745Cucumis meloCitrullus lanatus32.8112.4889.8147forward

Expression of CNT3039220

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MKPLLNQVIYKYTKVLKNYEKSTVLQENYMHKDLVVNVTLKITQRRSSLERETYHNPCSLEG*

Sequence

>CNT3039220
GAGAAAATGTAGTCTATGAAACCATTGCTTAATCAAGTAATTTATAAGTACACTAAAGTCTTAAAAAACTATGAGAAATCTACGGTCTTACAAGAAAACT
ATATGCACAAGGATCTTGTAGTAAATGTGACGCTGAAGATAACACAAAGACGATCTTCTTTAGAGCGAGAAACATATCATAATCCTTGCAGTCTAGAAGG
TTAAATTCGAGTTGTGGACCATCAAACAAAGGAGTTCAGTATTACTGGATCTCTCTACTTGAAAGTCCTGGATAAAGTAGTCCACATCCTCTTTAGTCTT
GTAGAAGTAAAGGCTAGTTTGAGCACTTGAGCTGACATTGAGAGCCCGATGGAGGGGCTGCACACAGTGATGTCCTGATTTGATGGCTACACCATGATGC
ATTAAAATATTTTAAGAATCCAATCTATAGAAAGCAGGTGATTCACTC