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Detailed information on CNT30391339


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30703316Triticum turgidumQuercus lobata23.1822.891.4370forward
CNT30727469Triticum turgidumCorchorus capsularis25.525.3393.5177forward
CNT30561830Triticum turgidumActinidia chinensis21.5221.3192.3165reverse complement

Expression of CNT30391339

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MWQAQREAGFTEQRQLPAFNGGRITGRCTPRPLGPRSLF*

Sequence

>CNT30391339
TGAGCTCAGTTGCGAGAGCTTATAACCCGAGTGGGGGGCATTAAGGTGATGTGGACGCTGTTGTAGCGTTGCGGGCCTGGTTTGGGTGTGCTACTGCCGG
CCCACCCGTTCCAAGTTGCGTAGTGGACCGCTTGGGGCCTATGCGAAAGCTGGGTCTCACGGTCCATAATGTGGCAGGCACAGCGTGAGGCTGGCTTCAC
AGAGCAGCGACAACTGCCCGCTTTCAACGGTGGAAGGATAACGGGCCGCTGCACTCCTAGGCCACTTGGGCCTCGCAGCCTATTCTAGTGAACCATCACT
TT