Detailed information on CNT30391155


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8LCE1|GLN12_ARATH, E-value = 6e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549182Triticum turgidumIpomoea triloba10.2323.5991.5571forward
CNT30458463Triticum turgidumSaccharum spontaneum14.1220.2591.8498forward
CNT30683585Triticum turgidumTriticum urartu91.510099.21635forward
CNT30351207Triticum turgidumEragrostis tef20.3221.6393.62141forward
CNT30100365Triticum turgidumOryza rufipogon18.0121.0190.4125forward
CNT30575092Triticum turgidumOryza barthii24.2121.8286.9168forward
CNT3040612Triticum turgidumMarchantia polymorpha26.3718.6788.52183forward

Expression of CNT30391155

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MCCACRLPSFSMAVLITPYPPASRIDLVL*

>peptide 2 (40 aa)
MDAPRSATPHLKVLMSAVSWWPVRRRCAARAACPASRWPS*

Sequence

>CNT30391155
GAGAACATGGAACCGTGTACTGTATGCATGACATGTGATCGAACGGAATCACATCACAAGGTTCCATGATTTCATTTATGGGAATGAGGAAACAACATTA
TTTTCAGAGCACACTGAGGACTCTTACTCTTATCTGAACGAGTAAAGTGAAAGACACGCCCCCAAAACAGGCTAGACCTTGCAAAAGAAACGGAAAACAC
GAAACATTTTGCAGAAATCAATCAATGGCCACCCTCGATCGAGAAGGTCGAGAGCCTAAGTGTCGTCCGGCGGTGTGGTAGGCATTGGCTGCTGGTCGCT
CAGAGCTCAGAGGAGGAGGGTGGTCTCGGCGATCATGGAGGTGACGACGTAGGGGTCCATGTTGGAGGCCGGCCTGCGGTCCTCGAAGTAGCCCTTGCCG
TCCTTCTCCGTGTCGCGGCCCACGCGGATGGACGCGCCGCGGTCCGCCACGCCCCACTTGAAGGTGTTGATGTCGGCGGTCTCGTGGTGGCCCGTGAGGC
GGCGATGTGCTGCGCGTGCCGCTTGCCCAGCTTCTCGATGGCCGTCTTGATCACGCCGTACCCGCCGGCCTCCCGCATCGACTTGGTGCTGTAGTTGGTG
TGCGCGCCGGCGCCGTTCCAGTCGCCCGGGATCGGCTTCGGGTCCAGGGACAGCACCACCCCGGCAACCTCCGTGATCCTCTGCAGCATCAACC