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Detailed information on CNT3039115


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020809Cucumis meloCitrullus lanatus21.9369.0887.36277forward

Expression of CNT3039115

Peptides detected in this lncRNA

>peptide 1 (65 aa)
LFLSFNLFFLKTNPNHQSYLFSVLISLSLKRQLSIFLPDINFALPPAARHSPTCVDGSSDLLCSA*

>peptide 2 (54 aa)
MWLKSSGINPYFQNPTLFNRKSSLLGITHFYLTVCTIKRTCCSRTTLLLIVQMK*

>peptide 3 (47 aa)
MKAYWTLLSNGEIFPFISTPEGELKHSGVMFVSFPININFNNVKRSC*

Sequence

>CNT3039115
TTATTCCTATCTTTTAATCTATTTTTCTTGAAAACAAACCCTAACCACCAAAGCTATCTTTTTTCTGTTCTCATTTCTCTTTCCCTTAAACGACAATTAT
CCATTTTCCTACCCGACATCAATTTTGCTCTTCCTCCGGCGGCGCGACACTCACCCACCTGCGTCGACGGGTCGAGCGACCTTCTGTGCTCTGCGTGATT
TGAATCTGTTTGGATAGCATCAATGGTAAAGGTCTTTTAATTGGGAAAAGAAAAAAGAAGAGAGGGTGGGGAGGTTCTTCGACCGGGTTGACAGCATCCG
ACGGAGTTTAGCCATCAGCATTCTTCCGGTAGCTAATGCCTATCGCCAGCTTCTCAAAGCTGTAAAGAAACATATTGGAAAGGAAGAGAGCAAGAAGCAT
TTTGTGGACTATGTGGCTCAAAAGTTCAGGGATAAATCCATACTTTCAAAACCCCACTCTGTTCAACAGGAAATCAAGCTTGCTCGGAATTACACATTTC
TACTTAACAGTGTGCACCATCAAAAGGACTTGCTGTTCTCGTACAACATTGCTGTTGATCGTTCAGATGAAATGAAGCGAATATTGGGGAAGTCTGCAGC
AAGTGTGGGGCTTTCACTTCCTGAGGTTTATCAACCCTGATGCCCTGTGGTTGTTTGATTAAGAAGAAGCATATTTTTTCCCCTATCAAAGAAGAATAAG
CACTTCGATGAGCTGCCAACTTGCCAGCAGACTTACATATTGTTGATTTCTTCTACCTTTTGATGCATCAATTCTATGCGCATGGAAAGAAATGAAGGCT
TACTGGACACTTTTATCAAATGGTGAGATATTTCCTTTTATTAGTACTCCCGAGGGTGAATTGAAGCATTCTGGTGTGATGTTTGTTTCATTTCCAATTA
ATATAAACTTTAATAATGTGAAAAGGAGCTGCTGAGTTTTGATGGAAAGCACTTTTACTTTATTACCATTGTCCAGAAATAAATGTTACATCTTGAAAGG
CATTGAGTATCAGTATGGAGGTTTTTAAATATCCATGATGCTGTTTGGTTTATTGTTGATTTAATAATCATCATTGCAGATAGAATGCCGTGGTGAGTAA
TTGACTGAGTTACAATTTGCTAAAGGCTCTTTGATGTTGGTTTGTTTGTAATGCTATATTTTTACTGTACTATGATGTATACAGATAGGTTTCGACTTTT
CCTGAAAGATTGGACAATTGAGTTGTAACATCCATCTTTGACATTATAATTGATATCTTGTCC