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Detailed information on CNT30390869


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697144Triticum turgidumOryza sativa34.6820.0794.48163forward
CNT30677012Triticum turgidumSetaria viridis34.6823.1288.34163forward
CNT30524410Triticum turgidumSetaria italica34.6820.8488.96163forward
CNT30184672Triticum turgidumSecale cereale68.0996.9791.56320forward
CNT30297056Triticum turgidumTriticum aestivum33.8346.4999.37159forward
CNT30555350Triticum turgidumOryza glaberrima24.262097.37114forward
CNT30438927Triticum turgidumAegilops tauschii69.3680.8992.02326forward
CNT30249379Triticum turgidumAvena sativa33.8340.0598.11159forward
CNT30465769Triticum turgidumSaccharum spontaneum34.6828.3589.57163forward
CNT30135675Triticum turgidumLolium perenne33.8341.9596.23159forward
CNT30353507Triticum turgidumEragrostis tef27.2310.0294.53128forward
CNT30365046Triticum turgidumSorghum bicolor34.6816.9388.96163forward
CNT30597113Triticum turgidumOryza meridionalis24.6815.4797.41116forward
CNT30371232Triticum turgidumOryza glumipatula34.6815.4294.48163forward
CNT30322408Triticum turgidumAsparagus officinalis31.0616.885.62146forward
CNT30151052Triticum turgidumBrachypodium distachyon21.2843.198100forward
CNT30104243Triticum turgidumOryza rufipogon34.6830.1994.48163forward
CNT30578126Triticum turgidumOryza barthii34.6819.3694.48163forward
CNT30498372Triticum turgidumDigitaria exilis27.0226.7490.55127forward
CNT30117952Triticum turgidumOryza nivara34.6813.1194.48163forward
CNT3039554Triticum turgidumMarchantia polymorpha33.442.985.99157forward

Expression of CNT30390869

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MMKTISEITQVAVVRYSHQKSERSCFFCP*

>peptide 2 (36 aa)
NNIFVIYAYNVLIDNGFTIYMQGLNQSSFKKSQSGF*

>peptide 3 (43 aa)
MKKPSMENMASRPFLISFTLSSAAWSGSVARPSGSNGPPGWSLS

Sequence

>CNT30390869
GCAATAATATATTTGTAATCTATGCATACAATGTACTAATCGATAACGGGTTCACTATATATATGCAAGGACTTAACCAATCAAGTTTCAAAAAGAGTCA
ATCTGGTTTTTAACGATGATGAAAACCATTTCAGAAATTACTCAAGTAGCAGTGGTCCGATACTCCCATCAGAAATCAGAACGGTCATGTTTCTTCTGCC
CTTGATAATTTACACGTACGGCACATTCGTACTCTCAAACTTTTCCCGGTAAAATTCACACAGCACATGCTGCTGCATCGCGCGCACGCAGCTGATCATC
AGCAACCGACGGGGCCCTCGCCGGTGACGTAGGCCTGGATGAAGAAGCCCAGCATGGAGAACATGGCCAGCCGCCCGTTCTTGATCTCCTTCACCTTGAG
CAGCGCCGCCTGGTCGGGGTCGGTGGCGAGGCCGAGCGGGTCGAATGGGCCACCGGGGTGGAGCTTGTCG