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Detailed information on CNT30390769


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30182409Triticum turgidumSecale cereale20.3248.5584.11151forward
CNT30222607Triticum turgidumHordeum vulgare15.8836.0985.59118forward
CNT30444118Triticum turgidumAegilops tauschii25.1742.7993.05187forward
CNT30688859Triticum turgidumTriticum urartu20.3224.3985.43151forward

Expression of CNT30390769

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSPLKRGEGTTKHQYNSVACHAELAGRRYSSRSHAVR*

>peptide 2 (35 aa)
MPAGWRRCRVHRRCRGSRQRSPDRRISPHRRLRGA*

>peptide 3 (42 aa)
MGLNRAANQHVIPFVVSKLYTMIVASIASTGINSIGVSQCINV

Sequence

>CNT30390769
AGTAGAGCTGAGTATAAGGTCCATATATCAAAAGTGCACACGGTACAAAGAAGAATAAACTCATGAGTCCTCTCAAAAGGGGTGAAGGAACAACCAAACA
TCAATATAACAGTGTGGCCTGCCATGCAGAGCTGGCCGGACGTAGGTACTCCTCTCGCTCTCACGCAGTGAGATAATATGAGAGCACTTATTCATATATA
TGTATATGTATGTGTATGACCTCAACGTACTCAACGTAGATCGCTCGAGCTATATGCAGCGACGATGAGAAGAAGTGGTCGATCAGCGAATCTTAGAACA
GTCCACAGATGAGCTGATGGCGTAGGGGACGCTGACGCTGCACTTTGAAGGGATGCCGGCGGGTTGGCGCCGTTGCCGCGTGCATAGGAGATGCAGGGGC
TCAAGGCAGAGGTCACCTGACCGCAGGATATCGCCGCATCGGAGGCTACGAGGAGCATAGCGGCCACCATGGCGACCAGCACGAGCTGAGTAGCTGCACC
GCGAGCCATCCCTATCGAGTTTGCAGTAGTAGTGGTGTTGAGCTCAGCTGGAGATGGTGAGATGGGCTAGATTTGCTAAGTGATTGTACCGGTGAGGTGT
TTCGTAGGGGGTGCATGGGCTTAAATAGAGCTGCTAACCAACATGTGATACCATTTGTAGTAAGTAAACTGTACACTATGATTGTGGCAAGTATTGCGTC
CACAGGGATAAATTCGATTGGTGTGAGCCAATGCATAAATGTT