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Detailed information on CNT30390749


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30293309Triticum turgidumTriticum aestivum75.4997.9999.86730reverse complement
CNT30555141Triticum turgidumOryza glaberrima23.7833.7794.35230forward
CNT30117202Triticum turgidumOryza nivara23.7812.3594.78230reverse complement

Expression of CNT30390749

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MIHESLIPNQEICCGICQLSKVIILRTRSSNPIE*

>peptide 2 (43 aa)
TLHMLVKHLPKLWKIHNSSVILDNTKKQDRVRYRSVKESGFIR*

Sequence

>CNT30390749
ACACTACATATGTTGGTAAAGCATTTACCTAAGTTATGGAAAATTCATAATTCATCAGTTATTTTAGATAATACTAAAAAACAAGATAGAGTAAGATACA
GAAGTGTAAAAGAAAGTGGATTCATCAGATGATACATGAGTCCCTAATTCCGAATCAAGAGATTTGTTGTGGAATTTGTCAATTGAGTAAAGTAATAATA
TTAAGAACTAGATCATCTAACCCCATTGAATGAAAAAATGAAATTCGATTTTCAAGGAAACTTTTGAATAAGAGATAAATAAACAATTGAATTGAAAAAA
AAACTTCTTTCTATTTTGGATAATTTCTTTTTCAATAGGACCCTCTTTTTGGAGTGAACGATCGAATATTCCCCTATTCCTTCTTATTTTAACTGATTGT
ATTCCATATGGAATAAGAGGAGAACAAAAGCATTCCACGACCTGCCAAGGGGCTGTTAAAAAAAGAAAGCTCTTCCTTGAATTTACTTTATTTTTATTCC
TTTTTCGAACTCCAACCAAAGTAGATTCGAAGACAAGTCACTTCAATTATCCTTTTAAGTTCTATTCTATCTTCTGTCTTTCCCTATTTCATCTCGTAAA
GTTCCGCGCTCGTAGTTTGGTCAAGAAAGTTAGGCCTAATCCAACAAACAATACAAGGATTAATTACGAATTATGAAAGGATAGATTTCACATATACTTG
TCCTTGTATTGTGTCAGTATGAGAATATCCTTCCTAAATTATTTATCCAAACCTATTGATCATTAACTTAGATTTTCCCAAGATTTTGGCTGCTATTCCG
AATTACTCTATTATTCCGAAGCCAATGAAAAGTAAGTAGAACCTACAAAAATGGGGTTTTCTATTGATGCCTTGAATAACATATAGCTTACCTATAGACA
AAAAATAAAAAAAATAAAAAAGTAATTATGTTTCGGAACCAGGCAAAACCAGATTGTTGTGCCACAG