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Detailed information on CNT30390228


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT001340, E-value = 1e-125

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30721122Triticum turgidumTriticum spelta82.2810099.64822forward

Expression of CNT30390228

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MPRAEVRVPSAAALKYEPRGLAIASPRGSYQALRR*

>peptide 2 (32 aa)
MSKCIGRGALRLRGKQPQKRGSTKRKRECRLE*

>peptide 3 (68 aa)
MNGAKQSAEAVGCQNASVGGRSALEGSNRKSGGRRSGSENVGLSNENIGENPMPRKPKVSSARFVHGG*

>peptide 4 (37 aa)
MEGESGPKIRPKGVVDGQQVNIPALPLVGTEGRRRLG*

Sequence

>CNT30390228
CGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCCGTCATCCTTAGTACAGACAGACTG
ATTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCC
TAAATGACCGCTCAGTGATAAAGGAGGTGGGGGTGCAAAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTTAAAGAGTGCGTAATAGCTCACTGA
TCGAGCGCCCTTGCGCTGAAGATGAACGGGGCTAAGCAATCTGCCGAAGCTGTGGGATGTCAAAATGCATCGGTAGGGGGGCGCTCCGCCTTAGAGGGAA
GCAACCGCAAAAGCGGGGGTCGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGAAAACATTGGTGAGAATCCAATGCCCCGAAAACCCAAGGTTTC
CTCCGCAAGGTTCGTCCATGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTCAATATTCCTGCACTACCCCTTGT
TGGTACGGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATAGGTTTAAGGACACAAGGTGACCCTGCTTTTTCAGGGTAAGAAGGGGTAGAGAA
AATGCCTCGAGCCGAGGTCCGAGTACCAAGCGCTGCAGCGCTGAAGTATGAGCCCCGTGGACTAGCGATTGCTTCTCCACGAGGCTCATACCAGGCGCTA
CGGCGCTGAAGTATGTAACTGATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGT
AGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCACAAAAGGGGGCCG