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Detailed information on CNT30389818


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30293493Triticum turgidumTriticum aestivum86.0683.7895.72537forward
CNT30369415Triticum turgidumOryza glumipatula22.615.2387.23141forward

Expression of CNT30389818

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKLNWLTDDDTTTYTCWNFLNRFQSLMAVMDG*

>peptide 2 (58 aa)
CTQLNCQFLPIHHNHQCLPYISCRDRTKSTENMDTRLARHQVARTDNTFVQTSILTME*

>peptide 3 (48 aa)
MAPTASPPVAILRRRQATTEPSSCATQYTTALSRLMLPPTKAPNVTAGF

>peptide 4 (79 aa)
MRLRVRFSVVGGGELLVGPLADEADVVDEGGDGAHGLAAGGDLEEEAGHDGAEQLRHPVHHRLEQADVAAHEGAECDGRV

Sequence

>CNT30389818
TTGTACGCAATTGAACTGTCAATTTCTTCCCATCCATCACAATCACCAATGCTTACCATACATATCATGTCGTGACAGGACAAAATCTACAGAAAATATG
GACACAAGATTGGCAAGACATCAAGTTGCCAGGACAGACAATACCTTTGTACAAACATCAATCTTGACCATGGAATAGAAGCATTCATAATTGAGGACAT
ACACCAAGACAAGAGATTATTCCTGACTGACTGACTCACACTGTTTACCCTGAATTTCTCAAAGACACGTGAGAGAGAGGGAGAGAGAATGAAACTAAAC
TGGCTTACTGATGATGACACGACGACGTACACTTGCTGGAATTTTTTGAATCGATTTCAATCTCTCATGGCGGTGATGGATGGATGAGATTGAGAGTGAG
GTTTTCAGTAGTCGGCGGTGGGGAGCTGCTCGTGGGGCCGCTGGCCGATGAAGCAGATGTCGTAGACGAGGGCGGCGATGGCGCCCACGGCCTCGCCGCC
GGTGGCGATCTTGAGGAGGAGGCAGGCCACGACGGAGCCGAGCAGCTGCGCCACCCAGTACACCACCGCCTTGAGCAGGCTGATGTTGCCGCCCACGAAG
GCGCCGAATGTGACGGCCGGGTTC