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Detailed information on CNT30389677


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3073023Triticum turgidumQuercus suber9.6621.3589.4757reverse complement
CNT30349660Triticum turgidumEragrostis tef17.826.7989.52105forward
CNT30595554Triticum turgidumOryza meridionalis13.7331.0391.3681forward
CNT30369283Triticum turgidumOryza glumipatula13.7320.8891.3681forward

Expression of CNT30389677

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MMHARHGACIWSMIDLAAAAGAAAAGAALALGAAAAAVLRRHLHAAGAPASIRSDIPINISNYIIHWLYQHV*

>peptide 2 (63 aa)
MIDDARTARCMHMVDDRSSSCSRSSRSWCRTCTGCSRSRRSPPPSPCRRSSCIHPFRYPNKHQ*

Sequence

>CNT30389677
AGGTGCATAGATAAAGGCCCTCGATCAGGTTGCGGTTACATGGTATGGTAGTAGTAGATCGATATGATCGATGATGCACGCACGGCACGGTGCATGCATA
TGGTCGATGATCGATCTAGCAGCTGCAGCAGGAGCAGCCGCAGCTGGTGCCGCACTTGCACTGGGTGCAGCCGCAGCCGCCGTTCTCCGCCGCCATCTCC
ATGCCGCCGGAGCTCCTGCATCCATCCGTTCAGATATCCCAATAAACATCAGTAACTATATAATCCATTGGCTGTATCAACATGTCTAGCTAGCGAATGA
TTCATGGTACAAGAGGAAATTAGTCGTTAATTAAGAGAAGGGACATACGCCTTGTGGGTGGCGGTGGCGGAGACGAGGAGGCCGTTGCCGCACTTGCAGG
CGGTGCCGCAGCCGCAGTTTCCTCCGCAGCAAGACATCCTCGGTTGGGTTGGAGCTTCGGAGATGAAGAGGCTTTGAATGGCTATGAGCTTCTTGTGTGC
TTCTTGCTGGCTTGAGGAATAATGGAGGGGCATGGAGGCCTATTTATAGGCAGGAGGAAGGAGAAGAAGAGATGCTGCACGCACGTATAG