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Detailed information on CNT30389603


BLAST search results

BLAST vs Swiss-Prot:
sp|F4HQ23|LRL27_ARATH, E-value = 4e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690663Triticum turgidumOryza sativa69.3619.4283.75240forward
CNT30149097Triticum turgidumBrachypodium distachyon62.1480.2290.23215forward
CNT30176115Triticum turgidumVigna angularis21.119.2186.373forward

Expression of CNT30389603

Peptides detected in this lncRNA

>peptide 1 (67 aa)
SNPEKFCFGGMSMSSELLSNISRTLVMVGRYAGNICTHHNPINVIFLAISSVSPVTSHACNPSSCAK*

>peptide 2 (57 aa)
MLVIHHLAQSDHKSSRENTFHWILQQLILHFSFLQPSPKASFHNYKHLTLLKPLQMFE

Sequence

>CNT30389603
AGCAATCCAGAGAAGTTTTGCTTCGGTGGCATGTCCATGTCATCTGAGCTTCTCTCGAACATTTCTAGAACTTTGGTTATGGTAGGGCGATATGCAGGCA
ATATCTGTACGCACCACAATCCAATTAATGTCATCTTTCTTGCGATTTCCTCAGTTTCTCCTGTGACTTCACATGCTTGTAATCCATCATCTTGCGCAAA
GTGATCATAAATCCAGTCGGGAAAATACTTTTCACTGGATTTTGCAACAGTTGATTTTACATTTCTCCTTCCTCCAACCATCTCCAAAAGCATCATTCCA
TAACTATAAACATCTGACTTTGTTGAAACCACTCCAAATGTTCGAG