Detailed information on CNT30389136


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709610Triticum turgidumGlycine max30.855.5890.3262forward
CNT30291456Triticum turgidumTriticum aestivum87.5672.7398.86176forward
CNT30437581Triticum turgidumAegilops tauschii10065.996.02201forward

Expression of CNT30389136

Peptides detected in this lncRNA

>peptide 1 (65 aa)
GGGGGDEEGGAGGLDLRVHVAAAAAVAALAGAAAAAASSAARHLRGCLGLDGGLDWCWLGASCVLL

>peptide 2 (58 aa)
VAVAATRRVAPAASTSGYMLQPPQPLPHLQALPQPQLPPQQDIFEVAWAWMEALIGVG*

>peptide 3 (54 aa)
GWRWRRRGGWRRRPRPQGTCCSRRSRCRTCRRCRSRSFLRSKTSSRLLGLGWRP*

Sequence

>CNT30389136
GGGTGGCGGTGGCGGCGACGAGGAGGGTGGCGCCGGCGGCCTCGACCTCAGGGTACATGTTGCAGCCGCCGCAGCCGTTGCCGCACTTGCAGGCGCTGCC
GCAGCCGCAGCTTCCTCCGCAGCAAGACATCTTCGAGGTTGCTTGGGCTTGGATGGAGGCCTTGATTGGTGTTGGCTAGGAGCTTCCTGTGTGCTTCTTG
C