Detailed information on CNT30388731


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30291706Triticum turgidumTriticum aestivum54.7344.73100191forward

Expression of CNT30388731

Peptides detected in this lncRNA

>peptide 1 (43 aa)
YRLNHGRFYLGVGLHAWECTCSAHAGRCLHTYKDPRSGSVTWY*

>peptide 2 (52 aa)
MINDLAAAAGAAAAGAALALGAAAAGAALALGAAAAAILRRHLHPAGAPAPIH

>peptide 3 (51 aa)
MHGSAPALLMLAGAYIHTKTLDQVALHGTRWMDGSIIDMMHARGACMIDDQ*

Sequence

>CNT30388731
TATAGGTTAAACCACGGGAGATTTTATTTAGGGGTCGGTTTACATGCATGGGAGTGCACCTGCTCTGCTCATGCTGGCAGGTGCTTACATACATACAAAG
ACCCTCGATCAGGTAGCGTTACATGGTACTAGATGGATGGATGGATCGATCATAGATATGATGCATGCGCGCGGTGCATGCATGATCGATGATCAATGAT
CTAGCAGCTGCAGCAGGAGCAGCCGCAGCTGGTGCCGCACTTGCACTGGGAGCAGCCGCAGCTGGTGCCGCACTTGCACTGGGTGCAGCCGCAGCCGCCA
TTCTCCGCCGCCATCTCCATCCCGCCGGAGCTCCTGCACCCATCCATCC