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Detailed information on CNT30387967


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONVVIT003033, E-value = 2e-166

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30600961Triticum turgidumFraxinus excelsior13.5923.6288.8981reverse complement

Expression of CNT30387967

Peptides detected in this lncRNA

>peptide 1 (64 aa)
GLVKRNGGHPSPLSALPRAIDIIRSSEIDFAENQLYSILVGLSPLATSHPRILPHTWVRSSKAC*

Sequence

>CNT30387967
GGGTTGGTAAAGCGAAATGGGGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTAGTGAAATAGATTTTGCGGAAAACC
AGCTATATTCGATCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTC
TCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTCAAATAGGAAGAACGTAAATCTTCCACCTCTGGAAAGCGCCTACACCTAATGGCTTAAGCC
GCTATTCCCATTTCCTCGCTGACCCATCATGCGAAAGGTACGCCGTTAGAGTGAGTGCGCCCGCGCTCCGCTCCTTCGACTGATTGTTCGCATCGGATCT
CAGGTTCTCTATTGCACTCCCCGATTGGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTG
GTCCCCCTTTCTCGCGTAAAAGCGATCATCATTCGAACACGTCGCGTTTTAACTAGCCATGGAGCTTGGATACGGTTTCCCGATCGGAGATCCATG