Detailed information on CNT3038777


BLAST search results

BLAST vs Swiss-Prot:
sp|P85086|RCA_ARAHY, E-value = 2e-25

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617865Cucumis meloSesamum indicum29.3838.3888.46104forward
CNT30524690Cucumis meloPhaseolus vulgaris33.6211.9585.71119forward
CNT30310249Cucumis meloCamelina sativa35.3155.5685.6125forward
CNT3075041Cucumis meloBrassica juncea17.826.5888.8963forward
CNT30621292Cucumis meloCajanus cajan36.7214.3285.38130forward
CNT30433485Cucumis meloPapaver somniferum28.5320.0883.17101forward

Expression of CNT3038777

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MIGTRGFSSLLYIPGSWTLVGLSAMFMSVALTICPVLRYS*

>peptide 2 (84 aa)
SVESGEIVTSDDDWNSGVLLLVVHSRELDIGGVIGDVHECGVNHLSCTKILIRAHNSIMSSRLHGSLKQRIHHSLSSCDVLLII*

Sequence

>CNT3038777
AGCGTAGAGAGTGGAGAAATCGTTACCAGTGACGATGATTGGAACTCGGGGGTTCTCCTCCTTGTTGTACATTCCAGGGAGTTGGACATTGGTGGGGTTA
TCGGCGATGTTCATGAGTGTGGCGTTAACCATTTGTCCTGTACTAAGATACTCATAAGAGCTCATAACAGCATAATGAGTTCCAGATTGCATGGGAGCTT
GAAACAGAGAATCCACCATTCCCTTTCCTCTTGTGATGTCCTGCTGATCATCTGAAATATCATATCCAAGTCCGGCCCATCTGTCTTTGTTGGTCTGCTT
CTCGAGATTCTCGTCTGGGATTGATTCCACTGCCACCACCTTGAAGCTACCCGA