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Detailed information on CNT30387693


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 1e-91

BLAST vs NONCODE:
NONCQUT001608, E-value = 2e-16

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30288857Triticum turgidumTriticum aestivum93.577.8100992forward
CNT30659819Triticum turgidumTriticum dicoccoides45.4361.1799.59482forward
CNT30371468Triticum turgidumOryza glumipatula24.0322.1585.88255forward
CNT30104669Triticum turgidumOryza rufipogon35.6345.686.51378forward
CNT30556975Triticum turgidumPanicum hallii23.0930.6686.53245forward

Expression of CNT30387693

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MNTIDQHLVLKERPGHKSKITPYGLPIHCGGSPQARRLKGSSSCFRFRVVYGH*

>peptide 2 (30 aa)
MKNMLWSSSRVVDKSEVHKRPSYIGHCFNS*

Sequence

>CNT30387693
CATATTCATTGCAGTGCCAAATAAAGAAACTTTTCCATGAATTAATAACATCAAGACAATGGTCCGCATGTTTTATATAATAAATATCACACAGGTTTTG
TATATGTGTAGCCGGCTCTAGAATTTACATATGCATGCTCGAGAATCTATGTTCGTACATACATACACAGACCATATAGAATGAAAAATATGCTCTGGTC
GTCCAGCAGAGTCGTGGACAAAAGTGAAGTTCACAAAAGACCTTCATACATAGGCCATTGTTTCAACTCGTAGTTTAGGCCTTGCCAGACTCCTCGCAAC
CCGGTGGCCTGAAGGCAATGAAGCTGACGCACTGCACCTGGCGTAGGTTGTCGAAGCCGATGACACGGACATAGGCGTCAGGGTACTCCTTCTTGACCTC
CTCCACCTCGTTCAGCACCTGTGTGGCGTCAGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTATCGGCCGTCGTAGTACCCGGGGGAGCTGTTG
TGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTTGAGCGGATCAGGTAGTCGACCTGCTTTAGGAGGGCCTCCGTGGAGA
GGGGTGGCAAGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGAATAGATGGAATGAACACAATTGATCAACACTTGGTGCTTAA
AGAAAGACCTGGCCATAAGTCAAAAATTACTCCTTATGGTCTGCCCATACATTGTGGGGGGTCTCCACAAGCAAGAAGGCTCAAGGGCAGCAGCTCTTGC
TTCAGGTTCAGGGTAGTGTACGGGCATTAAAAATGATATTATCTAGTACACATTGCGATAAAATCAATTTCCGTTCACAAAGTTTATGAGTTAAATATTC
CTACACATGTGAACCTGCTTACGGACTACATACATTGTGATGCACCATCTTAGTTTACTTTGGCCTGGTGTGTGGGTTACACATCCTAATTAAGGATAGC
TTTGGCTATGTACAGTGGAAATATCCGATAAATTAATCAACTGTGCCGACAAGAATATTCG