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Detailed information on CNT30387625


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 2e-79

BLAST vs NONCODE:
NONCQUT001608, E-value = 3e-16

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30720492Triticum turgidumTriticum spelta23.6361.0399.35307forward

Expression of CNT30387625

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MKNMLWSSSRVVDKSEVHKRPSYIGHCFNS*

>peptide 2 (53 aa)
MNTIDQHLVLKERPGHKSKITPYGLPIHCGGSPQARRLKGSSSCFRFRVVYGH*

Sequence

>CNT30387625
CATATTCATTGCAGTGCCAAATAAAGAAACTTTTCCATGAATTAATAACATCAAGACAATGGTCCGCATGTTTTATATAATAAATATCACACAGGTTTTG
TATATGTGTAGCCGGCTCTAGAATTTACATATGCATGCTCGAGAATCTATGTTCGTACATACATACACAGACCATATAGAATGAAAAATATGCTCTGGTC
GTCCAGCAGAGTCGTGGACAAAAGTGAAGTTCACAAAAGACCTTCATACATAGGCCATTGTTTCAACTCGTAGTTTAGGCCTTGCCAGACTCCTCGCAAC
CCGGTGGCCTGAAGGCAATGAAGCTGACGCACTGCACCTGGCGTAGGTTGTCGAAGCCGATGACACGGACATAGGCGTCAGGGTACTCCTTCTTGACCTC
CTCCACCTCGTTCAGCACCTGTGTGGCGTCAGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTATCGGCCGTCGTAGTACCCGGGGGAGCTGTTG
TGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTTGAGCGGATCAGGTAGTCGACCTGTTTCAGGAGGGCCTCCGTGGATA
GGGGTGGCAGGTAAGACAGAGGTACTCCTTCTTGACCTCCTCCACCTCGCTGAGCACCTGCGTTGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATT
GTCCAGTATCGACCGTCGTAGTAGCCGGGGGAGCTGTTGTGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGA
TCAGGTAGTCGACCTGCTTTAGGAGGGCCTCCGTGGAGAGGGGTGGCAAGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGAAT
AGATGGAATGAACACAATTGATCAACACTTGGTGCTTAAAGAAAGACCTGGCCATAAGTCAAAAATTACTCCTTATGGTCTGCCCATACATTGTGGGGGG
TCTCCACAAGCAAGAAGGCTCAAGGGCAGCAGCTCTTGCTTCAGGTTCAGGGTAGTGTACGGGCATTAAAAATGATATTATCTAGTACACATTGCGATAA
AATCAATTTCCGTTCACAAAGTTTATGAGTTAAATATTCCTACACATGTGAACCTGCTTACGGACTACATACATTGTGATGCACCATCTTAGTTTACTTT
GGCCTGGTGTGTGGGTTACACATCCTAATTAAGGATAGCTTTGGCTATGTACAGTGGAAATATCCGATAAATTAATCAACTGTGCCGACAAGAATATTC