Detailed information on CNT30387445


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673229Triticum turgidumSetaria viridis3.9126.6193.158reverse complement
CNT30180742Triticum turgidumSecale cereale16.2540.3788.8241forward
CNT30300936Triticum turgidumTriticum aestivum22.5996.2693.13335forward
CNT30658923Triticum turgidumTriticum dicoccoides66.2270.0999.69982forward
CNT30679204Triticum turgidumTriticum urartu20.2325.0694300forward

Expression of CNT30387445

Peptides detected in this lncRNA

>peptide 1 (32 aa)
LIPRTPLPNQRISLSPLVQTLATPSSMCRRPH*

>peptide 2 (49 aa)
MKLLLGKGVDVESESESGTPLVWAAGHGQQDAVKLLIEHNAKVSMKLWS*

>peptide 3 (64 aa)
MTTTIQSVKAHQIFDSRDNPTVESSGLRSTMRGRARPRWPPACGTPTSAPRCTSPPGRARQRTH*

>peptide 4 (79 aa)
MRCKTSSGSRSGHDDDHPVREGPPDLRQPRQPHRREFGSALDDEGKGAAAVATGVRDANKRTALHFAAREGQTEDTLIL*

>peptide 5 (82 aa)
HPSHPPPKSAHLPLTPRPNPSHALLHVPPPPLISPNTIVALLHEPDPHLLWLPFHSLSREGRDGRLTASAPGFRTPTPLHLL*

Sequence

>CNT30387445
CTCATCCCTCGCACCCCCCTCCCAAATCAGCGCATCTCCCTCTCACCCCTCGTCCAAACCCTAGCCACGCCCTCCTCCATGTGCCGCCGCCCCCATTGAT
TTCGCCCAACACCATCGTCGCTCTCCTCCATGAGCCGGATCCCCACCTCCTTTGGCTCCCCTTCCACTCACTCTCCCGTGAAGGCCGAGATGGACGTTTG
ACGGCCTCGGCTCCCGGATTCCGCACACCCACTCCACTACATCTGCTCTGATCTGATTCGATCTCGGCTTCCTCCCCAAGCCATGCGATGCAAGACCAGT
TCCGGCTCCCGCTCCGGCCATGACGACGACCATCCAGTCCGTGAAGGCCCACCAGATCTTCGACAGCCGCGACAACCCCACCGTCGAGAGTTCGGGTCTG
CGCTCGACGATGAGGGGAAGGGCGCGGCCGCGGTGGCCACCGGCGTGCGGGACGCCAACAAGCGCACCGCGCTGCACTTCGCCGCCCGGGAGGGCCAGAC
AGAGGACACATTGATATTATGAAGCTTTTGCTTGGTAAGGGAGTCGATGTCGAATCCGAAAGCGAGTCAGGTACTCCCCTTGTTTGGGCCGCTGGTCATG
GACAGCAAGACGCGGTCAAGCTTCTGATTGAACACAATGCTAAGGTGTCTATGAAGCTTTGGAGCTGAGGGACGGTGGATCTGACTACTTGCGCTAGGGT
GTTTTGAAGGTTTACATTCGTTTGACTGAATTATACACTACCGTAGAATTCTACACCATGTGGTGGACTTAAGTATCTTAGTGACTTCATTTGATGTGTG
TATTTCTGTTAATTTTAAGCTTCTGTTGCTCTGAAAATGTACCTCACTGACCGTTTGTCTATTTATTGTGTACTTCTTGCATGAGGATGTGACTAGTGAT
GCGGCGCGCCAAGAAGTAGTAGGGGAAGGGGGTCTCCTGCTCGAGGAGGTGGAGTAGGGGCGTGCCCAGCTAGCAGCCTTGTACTGCTCGTGGGGGAGGG
GCAGGAGGGGTCTGCTCCCCTGCTTCCATTGCGACCGCGGCAGGAGCAACGTTGCTGATGGCGATGGGTACGTGATGGTGGCTGGTATGGTGGACGACCC
AGAATATGTGGCCTCGCAAGTGCACATGTCGTAGCTTTCCTCCTCAAATGCTTCTGTTTCTGCCTCAGCTACTAAGCCAATAAACACCAAATCTGGAATG
AGAAAGAGGATGAGGCCTACTTGATTGGTGTTTTAACCATTTTGTTTGTTCATGTTGTGTGCATTGATTCCCATGAACTATAACCTGATTTGATGCCACC
TTGTCTTTTTTCAACTTGCAAGGACTAAGGATGTAAAGAAAACTAATTTTGTCGCTCGTAGAGAATTGTATTTATTGTTGACAATGTTGTGTAATTAGAA
TACCTGATTGTCTTTTGTAACTTAATTTCCTTGCATTTTCAACTCTGATTTTGAACGATTAAGGTTACTCTCATGAACAATTT