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Detailed information on CNT30387208


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 3e-91

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30150944Triticum turgidumBrachypodium distachyon34.7255.0988.59368forward

Expression of CNT30387208

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MKNMLWSSSRVVDKSEVHKRPSYIGHCFNS*

>peptide 2 (53 aa)
MNTIDQHLVLKERPGHKSKITPYGLPIHCGGSPQARRLKGSSSCFRFRVVYGH*

Sequence

>CNT30387208
CATATTCATTGCAGTGCCAAATAAAGAAACTTTTCCATGAATTAATAACATCAAGACAATGGTCCGCATGTTTTATATAATAAATATCACACAGGTTTTG
TATATGTGTAGCCGGCTCTAGAATTTACATATGCATGCTCGAGAATCTATGTTCGTACATACATACACAGACCATATAGAATGAAAAATATGCTCTGGTC
GTCCAGCAGAGTCGTGGACAAAAGTGAAGTTCACAAAAGACCTTCATACATAGGCCATTGTTTCAACTCGTAGTTTAGGCCTTGCCAGATTCCTCGCAGC
CTGGTGGCCTGAAGGCAATGAAGCTGACGCACTGCACCTGGCGCATGTTGTCGAAGCCGATGACGCGGACATAGGCATCAGGGTACTCCTTCTTGACCTC
CTCCACCTCGCTGAGCACCTGCGTTGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTATCGACCGTCGTAGTAGCCGGGGGAGCTGTTG
TGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAGGTAGTCGACCTGCTTTAGGAGGGCCTCCGTGGAGA
GGGGTGGCAAGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGAATAGATGGAATGAACACAATTGATCAACACTTGGTGCTTAA
AGAAAGACCTGGCCATAAGTCAAAAATTACTCCTTATGGTCTGCCCATACATTGTGGGGGGTCTCCACAAGCAAGAAGGCTCAAGGGCAGCAGCTCTTGC
TTCAGGTTCAGGGTAGTGTACGGGCATTAAAAATGATATTATCTAGTACACATTGCGATAAAATCAATTTCCGTTCACAAAGTTTATGAGTTAAATATTC
CTACACATGTGAACCTGCTTACGGACTACATACATTGTGATGCACCATCTTAGTTTACTTTGGCCTGGTGTGTGGGTTACACATCCTAATTAAGGATAGC
TTTGGCTATGTACAGTGGAAATATCCGATAAATTAATCAACTGTGCCGACAAGAATATTC