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Detailed information on CNT3038708


BLAST search results

BLAST vs Swiss-Prot:
sp|P25794|PIP2_PEA, E-value = 1e-73

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640394Cucumis meloNymphaea colorata12.7933.682.74168forward
CNT30546615Cucumis meloIpomoea triloba6.7733.0988.7689forward
CNT30504332Cucumis meloNicotiana attenuata5.4820.9984.7272forward
CNT30163276Cucumis meloPistacia vera729.8791.392forward
CNT30287172Cucumis meloTriticum aestivum7.4638.8987.7698forward
CNT30552699Cucumis meloOryza glaberrima7.9126.4681.73104forward
CNT30435838Cucumis meloAegilops tauschii736.9588.0492forward
CNT30658930Cucumis meloTriticum dicoccoides6.736.8288.6488forward
CNT30232947Cucumis meloAnanas comosus6.6236.7186.2187forward
CNT30680173Cucumis meloTriticum urartu6.8537.0487.7890forward

Expression of CNT3038708

Peptides detected in this lncRNA

>peptide 1 (35 aa)
EKRKRGIPKVSIFFSKPYMKKEKSEKRKTKQCNDN*

>peptide 2 (36 aa)
MQRQLRIDKSHKAGKRRVGIIISTFFFREINHYIAS*

>peptide 3 (30 aa)
MALITTWWYRAARAAPMKGPTQNIHCNLAT*

Sequence

>CNT3038708
TAGAAAAACGAAAAAGAGGGATACCTAAAGTTTCAATTTTTTTCTCAAAACCCTACATGAAAAAAGAAAAGAGCGAGAAAAGAAAAACAAAACAATGCAA
CGACAATTAAGAATTGACAAGTCGCATAAAGCAGGTAAAAGGAGAGTGGGTATCATTATTTCAACTTTTTTTTTTCGGGAAATTAACCATTACATAGCTT
CATAGCCACACATATAATTACAGATAACACTGCACTCCCTTAACAATTGGGTCCCAAAGTTGAAATTTTAAAAACCATTAGAGAAAAAAAAAATACAACA
CAAAAGGGGAAAACAGCCTTCTTTTTTCTTCTTTTCGGATCGGACGGCTGTGATTGATTGAAGAAGCATCATGGATTTAGATAAGATTTTCACTTGGACT
TGAAAGGGATGGCTCTGATTACAACTTGGTGGTACAGAGCTGCAAGAGCAGCGCCGATGAAAGGTCCCACCCAGAATATCCACTGTAATTTAGCCACATA
ATCATGTTATGTTTAACATTTAACATTAAGATTATTAAAGTTTATGAGATTAAGAAACTCACGTGATCATCCCATGCTTTCTCGTTGTTGTAAATAATGG
CGGCTCCCAAGCTCCGGGCTGGGTTGATGCCGGTGCCCGTTATCGGAATGGTGGCTAAGTGAACTAAGAACACTGCAAATCCGATTGGCAATGGTGCCAA
TATCTGTTCCATAAATTAACAATTTTTCTTTTAGACCAACTTCTATAATTTCTTTACGCTTTGCAGCTAAAAGTAACTTTCGAAAAGAGAGAGTCCCTAT
TTTTTCAACTCACCGGAACATGTGAATCTCTGGCGCTACGTTTAGCATCGGTGGCCGAGAAGACGGTGTAAACAAGGATGAAAGTACCAACAATCTCAGC
GCCAAGGCACTGCATCACCATGTAGAAAATCGCCCTAGTCAACGACAGCTTCCTCGCCAGAAACAGCCCGAAAGTCACCGCCGGGTTAATGTGCCCACCG
GAAATTCCAGCAGTACAGTAAACCAGAGCAAAAATCATACCGCCGAATGCCCAAGCAATACCCTGAATTCCGACTGTCTTACACGTGTTCCCCTCAATAT
TCTTGGACCGGACGACACCCATGACGTGAGCTCTTCTGGCTCAAACAACGGGGCCGGCGGTGGCTCCTTGTAGTCCTTAGCGTCATCTTGACTCTGGGCC
GCCGTTCCAATCGGCTGTCTCTCGTTGAATTTGTTAGCTCCAAGTCTAACATCTTCCTCCTTCCCTTCCATTTCGGAAAAACTTATCTGTGCTCACGAAG
ACGTTGGTTCTGTC