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Detailed information on CNT30386965


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 1e-36

BLAST vs NONCODE:
NONGMAT000508, E-value = 7e-27

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30325970Triticum turgidumAsparagus officinalis41.8128.8485.93199forward

Expression of CNT30386965

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MRPEMRFTPPLLASLRIAGLVMPWMLSRRTFRWRLAPPFPSPLPPLPRPDIVARFGRRRDS

>peptide 2 (67 aa)
RIELIALNRTKLLQSLLNPKTEHNNTRKPVSLIYHSTHHREQTRKLHRCWHHYRSSLRSRRGCGPGA*

>peptide 3 (55 aa)
QNRTDCIEQNKAITEPTEPQDRTQQHTQTSKSHLPQHTSQRANEEVAPLLAPLQI*

Sequence

>CNT30386965
CAGAATCGAACTGATTGCATTGAACAGAACAAAGCTATTACAGAGCCTACTGAACCCCAAGACAGAACACAACAACACACGCAAACCAGTAAGTCTCATC
TACCACAGCACACATCACAGAGAGCAAACGAGGAAGTTGCACCGCTGCTGGCACCACTACAGATCTAGCCTCCGAAGCCGTAGAGGGTGCGGCCCTGGCG
CTTGAGCGCGTAGACGACGTCCATGGCGGTGACGGCGTCACGGATGACGTTCTCGAGGAAGATCTTGAGGACGCCGCGGGTCTCCTCGTAGATGAGGCCG
GAGATGCGCTTCACGCCGCCCCTCCTCGCCAGCCTGCGGATCGCCGGCTTGGTGATGCCCTGGATGTTGTCCCGGAGGACCTTCCGGTGGCGCTTGGCCC
CGCCCTTTCCCAGCCCCTTGCCGCCCTTGCCGCGCCCGGACATCGTCGCTCGATTTGGGAGAAGAAGGGACTCGGG