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Detailed information on CNT3038681


BLAST search results

BLAST vs Swiss-Prot:
sp|P46486|PSAF_FLATR, E-value = 6e-64

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513785Cucumis meloJuglans regia55.8636.0180.8224forward
CNT30371574Cucumis meloArabidopsis thaliana25.4419.7388.24102forward
CNT30618119Cucumis meloSesamum indicum56.8644.4481.58228forward
CNT30273262Cucumis meloChenopodium quinoa56.1113.680.44225forward
CNT3019440Cucumis meloCitrullus lanatus57.1160.4293.89229forward
CNT30525128Cucumis meloPhaseolus vulgaris54.6150.8179219forward
CNT3091235Cucumis meloSolanum tuberosum54.6118.2881.74219forward
CNT3086026Cucumis meloVigna radiata32.4218.0381.54130forward
CNT30540845Cucumis meloBrassica napus28.9324.4783.62116forward
CNT30144134Cucumis meloMedicago truncatula40.931.4281.1164forward
CNT30313614Cucumis meloCamelina sativa26.9327.8487.96108forward
CNT30264705Cucumis meloBrassica rapa22.1910.6184.2789forward
CNT30716553Cucumis meloMalus domestica golden42.3925.8885.88170forward
CNT30623157Cucumis meloDaucus carota53.8721.8281.02216forward
CNT30356986Cucumis meloLactuca sativa25.1917.1582.18101forward
CNT30174403Cucumis meloVigna angularis32.4218.7181.54130forward

Expression of CNT3038681

Peptides detected in this lncRNA

>peptide 1 (38 aa)
LSVSSNRPAEASKHQTSGQRNINDNLLLGRFLFIPNGD*

Sequence

>CNT3038681
GCTCTCTGTAAGCAGCAACAGGCCAGCTGAAGCCTCTAAACACCAAACTAGTGGCCAACGGAACATCAATGATAATCTCCTTTTGGGTAGGTTTCTTTTC
ATTCCTAATGGCGATTAAGTAGCTCCTTCCAACCCATCCAATCCACCCAGCAATGTAAAGGAACAAGAATCCAGGAGTAATGAACTCACCCCAATGCCTC
TGGTCACCACTCACAATCAAATGAGGCAAATCGCCTCTTGGTCTTTTCGATCGTGGCTTTGATGGCAAGCGCCGGGGCGCTATCCGGGGCGTAGTTCTTC
AAAGCAGACTCAAGTTTCTTGATCTGCTGCTTCTCCCTCTTGGCGAATTGCTTGGATTCCTTGCAGGGGGTGAGACCGGAGATGTCGGCGACGGCGGGGA
G