Detailed information on CNT30386685


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 2e-91

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30436347Triticum turgidumAegilops tauschii45.5599.0997.81547forward
CNT30252135Triticum turgidumAvena sativa31.8944.0291.64383forward
CNT30658905Triticum turgidumTriticum dicoccoides47.3810099.12569forward

Expression of CNT30386685

Peptides detected in this lncRNA

>peptide 1 (63 aa)
ERVGLAAEPRAPLDFSIDFSLEFTYACSTTYVRTNTDHMEREICSGRKAESWTKVKFTNDHHT*

>peptide 2 (59 aa)
GAGRVSSGAPSPSRLQYRFFARIYICMLHNLCSYKHRSYGTRNMLWSESRVVDKSEVHK*

>peptide 3 (47 aa)
MHLILPPLLTLLRPAVDLRPWKGATEVAEEAITVGAMVLEERRWQAKL

>peptide 4 (44 aa)
MNRMRRCSILGAKSIVPTMLEKSVDKPKIAPDGQVSYVLFVCPQ*

>peptide 5 (31 aa)
MGRSHMYCSFVHNEESLRVALKLMGTLEVLR*

>peptide 6 (30 aa)
MHAPQPMFVQTQIIWNEKYALVGKQSRGQK*

Sequence

>CNT30386685
GGAGCGGGTAGGGTTAGCAGCGGAGCCCCGAGCCCCTCTCGACTTCAGTATAGATTTTTCGCTAGAATTTACATATGCATGCTCCACAACCTATGTTCGT
ACAAACACAGATCATATGGAACGAGAAATATGCTCTGGTCGGAAAGCAGAGTCGTGGACAAAAGTGAAGTTCACAAATGACCATCATACATAGGCCATTG
TTTCAACTTGTAGTTTAGGCCTTGCCGGACTCCTCGCAACCTGGTGGCCTGAAGGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGA
TGACGCGGACATAGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGTGTAGCGTCGGTGCACCCGAACATAGGCAGCTTCCACAT
TGTCCAGTATCGACCATCGTAGTACCCGGGGGAGCTGTTGTGCTCACGGAAAACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGG
ATCAAGTAGTCGACCTGCTTCAGGAGGGCCTCCGTGGAGAGGGGTGGCAAGTAAGACAGAGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGAA
TGAATAGAATGCGCAGATGCTCAATACTTGGTGCTAAGTCAATTGTACCAACAATGCTAGAAAAATCTGTTGATAAGCCAAAAATTGCTCCTGATGGGCA
GGTCTCATATGTATTGTTCGTTTGTCCACAATGAAGAAAGCTTAAGGGTAGCCCTTAAACTGATGGGCACTCTGGAGGTACTAAGATAATTTTATCTAGT
CCATGCTGCAATAAAGAGTATTTCCATTCACTAAGTTATGAGTTGATGGCTTTTACATACGGATCCCAGCTTATGGACAAGGCTGAATGAGCATCCAAAG
CCAAATGGTTTCCATAGGCAACAAACCAAACAGATAATAAGGTTTCGGAATAATCTATTGACCAAATTATGTTATACATTGGGGATGTTCTGTAAGTGAA
TTACTTGTACTGACAAAGAAACTCATATCAGTTTAATTAGTGACCGACATACCTGCATGCACCTGATCCTTCCGCCGTTGCTGACGCTGCTGAGGCCGGC
GGTCGACTTGAGACCCTGGAAGGGTGCGACGGAGGTGGCCGAGGAAGCCATCACAGTGGGGGCCATGGTGTTGGAGGAGAGAAGGTGGCAGGCTAAGCTT
G