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Detailed information on CNT30386363


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 1e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30658689Triticum turgidumTriticum dicoccoides74.6159.0397.34526forward
CNT30118025Triticum turgidumOryza nivara42.9826.1985.81303forward

Expression of CNT30386363

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLHNLCSYKHRSYRTKNMLWSESRVLDKSEVHKRQSYIGHCFNS*

>peptide 2 (30 aa)
MHAPQPMFVQTQIIPNEKYALVGKQSPGQK*

Sequence

>CNT30386363
GTCCGCTTGTTGTATATAATAAATATCACACTGGTGTTGTATATGTGTAGCCGGTGCTAGAATTTACATATGCATGCTCCACAACCTATGTTCGTACAAA
CACAGATCATACCGAACGAAAAATATGCTCTGGTCGGAAAGCAGAGTCCTGGACAAAAGTGAAGTTCACAAAAGACAATCATACATAGGCCATTGTTTCA
ACTCGTAGTTTAGGCCTTGCCAGACTCCTCGCAACCCGGTGGCCTGAATGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACG
CGGACATAGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGCGCCTTGCCAGACTCCTCGCAACCCGGTGGCCTGAAGGCGATGA
AGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACGCGGACATAGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTG
TGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTATCGACCGTCATAGTATCCGGGGGAGCTATTGTGCTCACGGAAGACGAAACCA
ACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAAGTAGTCGACCTGCTTCAGGAGGGCTTCCGTGGAGAGGGGTGGCAAGTAAGACAGGG
TCTCA