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Detailed information on CNT30386300


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30577866Triticum turgidumOryza barthii39.3415.2999.2249forward

Expression of CNT30386300

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MGTNEQGYHLLWPDLPIFLENQFTARRTPSSVLCCLC

>peptide 2 (70 aa)
VFGVSLGLVKRNGGHPSPLSALPRAIDIIRSTEIDFAENQLYAILVGLSPLATSHPRILPHTWVRSSKAC*

Sequence

>CNT30386300
GTATTCGGAGTTTCCCTGGGGTTGGTAAAGCGAAATGGGGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGAAA
TAGATTTCGCGGAAAACCAGCTATATGCGATCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTC
CAAGGCCTGTTAGAGCTCTCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTCAAATAGGAAGAACGTAAATCTTCCACCTCTGGAAAGCGCCTA
CACCTAATGGCTTAAGCCGCTGTTCCCATTTCCTCGCTGACCCATCATGCGAAAGGTACGCCATTAGAGTGAGTGCGCCCGCGCTCCGCTCCTTCGACTG
ATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCTCGGCTTAGAGGGTGGTCCCCCTTTCTCGCGTAAAAGCGATCATCATTCGAACACGCCGCGT
TTTACTGGGAAGGATCGAACCATGGGAACGAATGAACAGGGCTATCACCTTCTTTGGCCGGATCTTCCAATCTTTTTAGAAAACCAGTTCACTGCGCGCC
GCACCCCGTCATCAGTCCTGTGTTGCCTATGCT