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Detailed information on CNT30386026


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 2e-72

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30287807Triticum turgidumTriticum aestivum89.9310097.381143forward
CNT30221104Triticum turgidumHordeum vulgare66.6469.4391.62847forward
CNT30657592Triticum turgidumTriticum dicoccoides50.8374.5195.82646forward
CNT30681645Triticum turgidumTriticum urartu65.1556.699.15828forward

Expression of CNT30386026

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MHAPQPMFVQTQIIPNEKYALVGKQSPGQK*

>peptide 2 (31 aa)
PPTSCETYPLQCQIKKVFRELTAGQWSACCI*

>peptide 3 (44 aa)
MLHNLCSYKHRSYRTKNMLWSESRVLDKSEVHKRQSYIGHCFNS*

Sequence

>CNT30386026
TCCACCAACTAGCTGTGAGACATATCCATTGCAGTGCCAAATAAAGAAAGTTTTCCGAGAATTAACAGCAGGACAATGGTCCGCTTGTTGTATATAATAA
ATATCACACTGGTGTTGTATATGTGTAGCCGGTGCTAGAATTTACATATGCATGCTCCACAACCTATGTTCGTACAAACACAGATCATACCGAACGAAAA
ATATGCTCTGGTCGGAAAGCAGAGTCCTGGACAAAAGTGAAGTTCACAAAAGACAATCATACATAGGCCATTGTTTCAACTCGTAGTTTAGGCCTTGCCA
GACTCCTCGCAACCCGGTGGCCTGAATGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACGCGGACATAGGCGTCAGGGTACT
CCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGCGTGGCGTCGGTTGTCGAAGCCGATGACGCGGACATAGGCGTCAGGGTACTCCTTCTTGACCTCCT
CCACCTCGTTGAGCACCTGTGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTATCGACCGTCATAGTATCCGGGGGAGCTATTGTG
CTCACGGAAGACGAAACCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAAGTAGTCGACCTGCTTAAGGAGGGCCTCCGTGGAGAGG
GGTGGCAAGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGAATAGATGGAATTAACACAATTGATCAACACTTAGTGCTTAAAG
AAAGACCTAGCCATAATAAGGCAAAAATTACTCCTTATGTCCATACATTTGTGGGGGGGTCTCCACAAGCAAGAAAGCACAAGGGCACCTCTTTCTTATC
GGTAGTGTATGGGCATTAAAATTAATATTATCTAGTACACATTGGAATAAAATCGATTTCAATTCACAAAGTTTATGAGTTAAATATTCCTACACATGTG
AACCTGCTTACGGACTACATTGTGATGCACAGTTTGGCCGGGCATGTGGGCGTCCTACGGATAGCTTTGCCTATGTGCAGTGGAAATACCCGATAAATTA
ATCAATTGTGGCAACAAAAACATTCATGCCAGCTTAGTGTCCGTCATCCTTCGCTAAAAAAAATCGAAAAGGAGGATAACTCCAGCCTCTGCATCAAGTG
ATATGCACACTGTCATTTTTATTATATTATTCGAAAGAGTCTAACAAAACAAATACGATTTTAAACCAAAG