Detailed information on CNT30385584


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 3e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30489027Triticum turgidumOlea europaea41.4957.881200forward
CNT30592011Triticum turgidumMusa acuminata26.7631.8582.95129forward
CNT30681212Triticum turgidumTriticum urartu65.3566.8896.51315forward
CNT30584443Triticum turgidumEchinochloa crusgalli60.7942.2883.28293forward

Expression of CNT30385584

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MKEMWGCMMATSGYKMVKSGCMKEMSDYKMATLGYKMATTDCMQEMSGSMLERSGCMQEMSGSMPERLDCS*

>peptide 2 (60 aa)
MWGCSSEMSESMTDWLESMMDCSDCRKESQEYMMVMQGCSWVMRGCMTEKWGCSCVLALG*

Sequence

>CNT30385584
GCGACGTCGGGCTATAAGTTGGCGATGTAGGGCTGTATGAAGGAGATGTGGGGCTGTATGATGGCGACGTCGGGCTATAAGATGGTGAAGTCGGGCTGTA
TGAAGGAGATGTCGGACTATAAGATGGCGACGTTGGGTTATAAGATGGCGACGACGGACTGTATGCAGGAGATGTCGGGCAGTATGCTGGAGAGGTCGGG
CTGTATGCAGGAGATGTCGGGCAGTATGCCGGAGAGGTTGGACTGTAGCTAGGAGATGTGGGGCTGTAGCTCGGAGATGTCGGAGAGTATGACGGACTGG
TTGGAGAGTATGATGGACTGCTCGGACTGTAGGAAGGAGAGCCAGGAGTATATGATGGTGATGCAGGGCTGTAGCTGGGTGATGCGGGGCTGTATGACGG
AGAAGTGGGGCTGTAGCTGTGTCCTGGCCCTGGGCTGAACACCGGAGAAGATGGACTGTAACCTCCAGACGACGGGCTGTAG