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Detailed information on CNT30385268


BLAST search results

BLAST vs Swiss-Prot:
sp|Q85ZU5|MATK_HORJU, E-value = 3e-96

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616211Triticum turgidumSesamum indicum14.4227.9787.05139forward
CNT30185941Triticum turgidumSecale cereale55.1958.6597.74532forward
CNT30263944Triticum turgidumBrassica rapa21.898.6279.62211forward
CNT30683192Triticum turgidumTriticum urartu36.3134.5599.71350forward
CNT30499058Triticum turgidumDigitaria exilis18.7842.5992.27181forward

Expression of CNT30385268

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MKVEVYTLVDTKSVFSKIHYDNEKDFYISDQIDQEYPNLINLSKWVY*

Sequence

>CNT30385268
CAATGTCAACCAAGTCAGCCCAAAGATTAGCTATCCATATAACTAAATTAACCAAACCAATAATTTTGTATTTGTAAATGAAGTGAGTCAAAGTTAAAAA
CTTTGATGGGTCTTTTCTATATGGGTTGCCCGGGACTCGAACCCGGAACTAGTCGGATGGAGTAGATAATTCTTCCTTGTTACAATAGAGAAAAATCCCT
CCCCAAATCGTGCTTGCATTTTTCATTGCACACGACTTTCCCTATGTAGAAATAGCCAATTTCTATTCCAAAGAGGAAGTTCTACTAATTTTTTTAATTA
GTAAGTTGATTCACCTACTCTTTATTATAATAAAAAGAACATTTCAGAATGAAAAATAGAAAAGTTTTTTCTTGATCATTTATCAACCCTTTCCTGTTTC
TTAATTTCGTCTAATGATTAATTAAGAGGGTTGACCAGGTCATTGACACGTATAATATCCAAATACCAAATACGCTCAGTGTGTGATCCACAGAAAGAAA
AAAGAGTTGTTTTGGTGAACATCAAAGAAAAAACTTGCTCTTCTTCCATAAAAAATTCTTCTAAAAATGCCGAACCCAACCGTTGCATAAAAGTTCGTAC
CGTGCTTTTATGTTTACGAGCTAAAGTTCTAGCGCATGAAAGTCGAAGTATATACTTTAGTCGATACAAAGTCCGTTTTTTCGAAGATCCACTATGATAA
TGAAAAAGATTTCTACATATCCGACCAAATCGATCAAGAATATCCCAATCTGATAAATCTGTCCAAATGGGTTTACTAATAGGATGCCCCGATCCAGTAC
AAAATTGAGCTTTTGATAAGTATCCTATGAGGAGAGTAGCGGGGACTATGGNNNNNNNNNNGTGATCCACAGAAAGAAAAAAGAGTTGTTTTGGTGAACA
TCAAAGAAAAAACTTGCTCTTCTTCCATAAAAAATTCTTCTAAAAATGCCGAACCCAATCGTTG