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Detailed information on CNT30385027


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30219730Triticum turgidumHordeum vulgare32.8836.8688.43484forward
CNT30435125Triticum turgidumAegilops tauschii43.9579.3994.28647forward

Expression of CNT30385027

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MGKVCCSSESEEEAGFSFLGLLVAAVIALVFMLLCTPPKRRCVTIYPCC*

>peptide 2 (48 aa)
MVISLCLSRIFPPEESQTPVHLCKLPSLQKGLYSCRMSPLFLIFSPFV*

>peptide 3 (61 aa)
MLKGRHKRKARSVCQILCISTSGQLISLTMPYMTGVSGLGGCEHRLSCPQRRKGSTGGWHH*

Sequence

>CNT30385027
GGCGCAAAGTTGAACAGCCATCTATCTAACATTCCATGCTGAAAGGCAGGCATAAAAGAAAGGCCAGATCTGTTTGCCAGATACTATGTATCTCAACATC
TGGGCAGTTGATCAGCCTAACAATGCCATATATGACCGGCGTCAGTGGCCTGGGTGGGTGCGAGCATAGGCTGAGCTGTCCTCAGAGACGGAAGGGGAGC
ACAGGAGGGTGGCATCATTGAAGACCTGATAGCGATGCCTCAACAAACTGGCCACACCACAGCGATCATGGCCGTGGTGGTATAAGAAGCAAAGAAGCGT
ACCACTGCTAGGAAGCGAGCCTCTCTTCGTCTGACCACCACTGATCTCCAGAGTAGGCAGCACCGGGAAGCAACCTTTCTGCTCAGGCTAGCATGGGGAA
GGTGTGCTGCAGCAGCGAGTCGGAGGAGGAGGCGGGCTTCAGCTTCCTGGGGCTCCTCGTCGCGGCCGTCATCGCCTTGGTGTTCATGCTCCTCTGCACG
CCGCCGAAGCGGCGCTGCGTCACCATCTACCCGTGCTGTTGAGGCTGAGGAGTCTCCAAGGATCTCTGGTTGCTGGGAGGAAGGTTCGGTTGTTCATGGG
AGGGAGCAGGCCAGGCAATGGTTCCTGGTTTTCTTCGGTTCAGAAATAATTTCTACACTACTGAATTGTAGGACTCGTCGAAACTGTAAGCCATATTTAT
CGGCATATTCGGCTGTCCATCTCCATCTGTAGCATGAACTGATACATACATCTGGGGGGAATAGATATCATCAGACTTGTTATGTTGTTTTCACTTGTCC
TGCTCCCTTCTCTCTTTCTCTCCTCTGTTTGTGTTTTGTTTTCTCTTTCAGATCTTTTTATATGATCGTAACACAAAAGCACAGAAGATTGGCTATCTGT
TGGCACATCCATGATGCAATTAAATAACAGAAAAGTTCAGTGATATTTTTTTGGTGATCAAGTGGTTCTGTAGTGACTCCAAGAGGATGCACGTCTTAGT
GCAAGTTCCAGTAGGAAAGCACTAACCAGAAACAGGGCTACAAAATAGTTCAAGATTAGACCAAAGATTCTACACTTCTTAGCTGATCTGAAAATTCTAC
TAGGCAGTCTGAAGAAGACCATCATTCAACCGCTTGATTTTCTATTTATCAGTTACTGTAGATAATTGTCAGTGCATCTTAAGCGGCAGCAGGAGCACCA
GGCCGGTATTGCTTTGCGGCTCATGGTTATCTCTCTTTGTTTGTCTAGGATCTTTCCCCCGGAAGAATCTCAGACTCCAGTACACCTCTGTAAACTCCCC
AGTCTCCAGAAGGGCCTCTATAGCTGCAGAATGTCACCCCTTTTTCTGATTTTTTCTCCTTTCGTATAATTTTCCAGGAATGTCTGCACTCTACAGATTC
AGGAATCTTGCTTGCTAGTTTAACGGGGATCCATGAAGATCTGCTCAGTCATCAAGATCTCACTGGGTGCAA