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Detailed information on CNT30384777


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30284742Triticum turgidumTriticum aestivum87.0187.27100576forward

Expression of CNT30384777

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MLPAIFSFPPPSYLGLHNLPPEACICFPPL*

>peptide 2 (49 aa)
MSLIRVIFWNSSSNSSQNGRYGKEQEEKDRRNLSNSNKWCLHRLISDPT*

>peptide 3 (44 aa)
MAMAKRIRCDESHPCNILEFLFQLVPEWALWQRTRRKRQKEFVQ*

>peptide 4 (43 aa)
MFASRGKRKARKRISSSLRTERSLSRLGTKPGKNPKCCLKNAI*

>peptide 5 (33 aa)
ALIPTPLSPPNQQVVGWWASVSLFAKMDTYTTQ*

Sequence

>CNT30384777
AGCCCTCATACCCACTCCTCTTTCCCCACCAAACCAACAAGTAGTAGGTTGGTGGGCCTCGGTATCTCTATTTGCTAAGATGGATACCTACACCACTCAA
TAGTTCCAATTCATTGTTTTTTATCCCATAGGAAAGAAAATGCTTCCAGCAATTTTTTCCTTTCCTCCTCCGTCATACTTAGGTCTTCACAACCTTCCAC
CGGAGGCTTGTATCTGTTTTCCTCCTCTTTAGCCATTACTTCTTTAATCATATCTTTGATCTTCTTTAGGGGCAATTTAAACATGTTCGCATCCCGCGGG
AAGCGGAAAGCCAGAAAGAGAATTTCCTCCAGTTTAAGAACCGAAAGGAGTTTATCCAGACTTGGTACCAAACCCGGGAAAAACCCTAAATGTTGTCTTA
AAAACGCTATATAAGCAGGGTTATAGGAATCAATAGATTCCCCTCCCTCCGCTTCAGAGGAGCAGCTTCTTCTATGGCTATGGCCAAAAGGATCCGGTGC
GATGAGTCTCATCCGTGTAATATTTTGGAATTCCTCTTCCAACTCGTCCCAGAATGGGCGTTATGGCAAAGAACAAGAAGAAAAAGACAGAAGGAATTTG
TCCAATAGTAACAAATGGTGCCTCCACAGGTTGATATCCGATCCAACCTAGTAGTGAGCAAT