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Detailed information on CNT30384202


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673952Triticum turgidumSetaria viridis20.7752.3697.38344reverse complement
CNT30177674Triticum turgidumSecale cereale86.9670.9498.191440forward
CNT30285397Triticum turgidumTriticum aestivum69.938797.751158forward
CNT30221081Triticum turgidumHordeum vulgare38.3531.3697.8635reverse complement
CNT30538116Triticum turgidumBrassica napus61.4183.9196.261017reverse complement
CNT30460491Triticum turgidumSaccharum spontaneum10.3384.6598.83171reverse complement
CNT3067405Triticum turgidumLeersia perrieri19.1476.5795.27317reverse complement
CNT30647597Triticum turgidumRosa chinensis18.3659.6193.75304reverse complement
CNT30203328Triticum turgidumHelianthus annuus38.5377.5295.92638reverse complement
CNT30347224Triticum turgidumEragrostis tef10.0266.494.58166reverse complement
CNT30371505Triticum turgidumOryza glumipatula11.8479.3598.47196reverse complement
CNT30646085Triticum turgidumCannabis sativa7.5528.6789.6125reverse complement
CNT30318666Triticum turgidumAsparagus officinalis43.1881.3494.13715reverse complement
CNT30576588Triticum turgidumOryza barthii7.8529.6199.23130forward
CNT30604605Triticum turgidumOryza punctata13.0493.5194.44216forward

Expression of CNT30384202

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MHHLCPRSRGHPSLSRGFAACQALVRFFALHQIKPHAPPLVRAPVNSFEFHSCEHTPQAGYLTR*

>peptide 2 (57 aa)
MLIPQIPSLFLLREKKLTTRRPSTSTRHCSVRLSPIAENSPLLPPVGVWAVSQSQCG*

>peptide 3 (47 aa)
MTSNMASSYSVTGGVYKARERIHRRMDDRRLLAIPASCRRVAACNPN*

>peptide 4 (42 aa)
MSLVLLHPKRKKTSISKFSSDVAAFFLGVKKCQTKIPNKHKH*

>peptide 5 (30 aa)
MPPAFILSQDRTLHEIHSCITYSFLIRRQSR

Sequence

>CNT30384202
CATGAGCTTGGTCTTACTTCACCCTAAACGAAAGAAGACTTCCATATCCAAGTTTAGCTCAGACGTAGCTGCCTTCTTTTTGGGCGTGAAGAAGTGTCAA
ACCAAAATACCCAATAAGCATAAGCATTAGCTCTCCCTGAAAAGGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCCAGT
CACAAGCCTAGCCTTAGGCATCCCCCTCCTTACAAATAAGGGTAATGACTTCAAACATGGCCAGCTCCTATAGTGTGACGGGCGGTGTGTACAAGGCCCG
GGAACGGATTCACCGCCGTATGGATGACCGGCGATTACTAGCGATTCCTGCTTCATGCAGGCGAGTTGCAGCCTGCAATCCGAACTGAGGACGTGTTTTT
GGAGTTAGCTCACCCTCGCGAGATCACGACCCTTTGTCCCGCCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGGCCTCATCCT
CTCCTTCCTCCGGCTTAACACCGGCGGTCTGTTCAGGGTTCCAAACTCATAGTGGCAACTAAACACGAGGGTTGCGCTCGTTGCGAGACTTAACCCAACA
CCTTACGGCACGAGCTGACGACAGCCATGCACCACCTGTGTCCGCGTTCCCGAGGGCACCCCTCTCTTTCAAGAGGATTCGCGGCATGTCAAGCCCTGGT
AAGGTTCTTCGCTTTGCATCAAATTAAACCACATGCTCCACCGCTTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTCATTCTTGCGAACATACTCCCCAG
GCGGGATACTTAACGCGTTAGCTACAGCACTGCACGGGTCGAGTCGCACAGCACCTAGTATCCATCGTTTACGGCTAGGACTACTGGGGTCTCTAATCCC
ATTTGCTCCCCTAGCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTTGCGATCTCAATGCATTTCACCGCTCCA
CCAGAAATTCCCTCTGCCCCTACCGTACTCTAGCTTGGTAGTTTCCACCGCCTGTCCAGGGGTTGAGCCCTGGGATTTGACGGCGGACTTGAAAAGCCAC
CTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATAC
CGTCATTGTTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTAGGCCTTCCACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTC
CCCACTGCTGCCACCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT
ACCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTTGGCCTACGGGGTATTAGCAACCGTTTCCAGTTGTTGTTCCCCTCCCAAGGGCAGGTTCTTAC
GCGTTACTCACCCGTTCGCCACTAGAAACACCACTTCCCGTTCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAGCCAGGATCGAACTCTC
CATGAGATTCATAGTTGCATTACTTATAGCTTCCTTATTCGTAGACAAAGCAGATT